| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4084 |
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| Symbol | |
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| ID | 5541595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5295697 |
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| End bp | 5296692 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640896196 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001434134 |
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| Protein GI | 156744005 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.313929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA TTATCCCTAC TGCCGGGCTT GGGACGCGCC TGCGCCCACA TACGTACAGT
AAACCCAAGC CGCTGGTGTC GGTTGCCGGA AAGCCGGTCC TCGGTCATAT TCTCGATACG
CTGACCCGAT TTCCAATCGA CGAGATGATC TTCATCACCG GCTATCTGGG CAATCAAATT
GCCGATTATG TCACATCAAA TTATAAAATC CCGGCGCGCT TCATCGAACA AACGGAACTG
AAAGGTCAGG CGCATGCCGT CTATCTGGCG CGTGAAGTTG TCGATGGTCC CACGCTCATC
CTGTTCGTGG ATACGATTTT CGAGGCAGAC CTGAGTTGTC TGACCGAACA GGATATCGAT
GGCGCCATTT TCTGCAAGGA GGTGGACGAT CCGCGGCGGT TCGGCGTGGC GTTTACCAAA
GATGGATTCA TCACCCGGCT CGTGGAAAAA CCGGTGACCG ATGAGTCGAA ACTGGCGATG
ATCGGGCTGT ATTACATCCG CGACATTCAG TGGTTGATGC GCGCAATCGA AGTGCTCATG
CTGCGCAATA TTCAAACGAA AGGCGAGTAC TTCCTGACTG ATGCCCTGCA ATTGATGGTC
GAGAATGGCG CCCGTTTCAC TGCGCCGACG GTCGATGTCT GGGAAGACTG CGGGAAACCA
GAGACGGTAT TGCAAACGAA TCGGTATCTG CTCGATCACG GTCGGGATCA TGTCGATGCT
TCTCGATTGG ATGGTTCGAT CATTATTCCG CCTGTCTATA TCGACGATAC GGCGCGCGTG
ATCAACTCGA TCATCGGTCC GTATGTGTCG ATAGCGGCGG GGGCGATTGT CAAAGACTCG
ATCATTCGCG ATTCGATCAT CAATCGCGAT GCGCAGATCG TCTCCGCTAC ACTGCAATCG
AGTCTGATTG GTGATCACGC AGTGGTTCTG GGCGATTTTC GCGAGCTCAA TGTGGGAGAT
TCTTCCGAAA TCCGGTATGG ACGCCCTGCA CATTGA
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| Protein sequence | MKVIIPTAGL GTRLRPHTYS KPKPLVSVAG KPVLGHILDT LTRFPIDEMI FITGYLGNQI
ADYVTSNYKI PARFIEQTEL KGQAHAVYLA REVVDGPTLI LFVDTIFEAD LSCLTEQDID
GAIFCKEVDD PRRFGVAFTK DGFITRLVEK PVTDESKLAM IGLYYIRDIQ WLMRAIEVLM
LRNIQTKGEY FLTDALQLMV ENGARFTAPT VDVWEDCGKP ETVLQTNRYL LDHGRDHVDA
SRLDGSIIIP PVYIDDTARV INSIIGPYVS IAAGAIVKDS IIRDSIINRD AQIVSATLQS
SLIGDHAVVL GDFRELNVGD SSEIRYGRPA H
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