| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4063 |
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| Symbol | |
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| ID | 5541574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5273055 |
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| End bp | 5275148 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896175 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001434113 |
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| Protein GI | 156743984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.21557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.035765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAT TTGAGCTTTC CTTCACTCCA ACGTTCTATT ACGAATCGCT CGACCTGCCG
CGCCACGTGA GCAAGACCAT CACCAGAAAG TTGGAAACCA TCGCCGACGA TCCCTATTCA
GCGCGCGGCG ATGCGAAGAA ACTCAAAGGG TACGACAATG TCTACCGCGT GCGGGTTGGC
GACTATCGCA TCTGCTATTG CATCGGCAAA GGGTGGGTCA AACTGCTGAG CGTGCGCAAG
CGTGATGAGC GCACATATGA AGATGACCTG CCTGATATTG CTCCGCCGGC ATTGCCGCCT
GATCCTGTCA CGCTGACCCC CAGGGCGCAT GGCGCTGTCG AGGAGCAGTT TGTGCTCAGC
AAACCGCCGA TGGATGCTGC ACTGTTATCC AGCGCGCTGC CGCCGAGTCG TCCGCTCCCA
TTTCCAATAA CGGAAGATAT GCTGGAACGC TGGCGGATAC CCGCACAGTA CCGCACTATC
ACGCTCACCG CGCGCACCGA GGACGATCTG CTCAATCTGC CGATCCCTGA ACGTCACCTC
ACGCTCCTGC TCGACAATCT GTTCCCCCGA TCGCTCGATG CGATTGCTGC ACAGCCCGAA
TTCGTGCTTT CAACGCCAGT CGATATCGAA CGATTTGCAG AAGAGGACCT GACCGGCTTT
CTGCTGCGCC TCACGCCCGA TCAGGAACGA TTGGTGAACC AGGATCGCCG CGGACCTATC
CTCGTCCGTG GCGGACCGGG AACCGGCAAA TCCACGCTGG CGCTCTACCG TGTGCAGCGC
TTGCTCGAAC AGGGCGTCAC GTCGGTGCTC TTCACCACCT ACACGAATGC GCTGGTTGCC
TATTCGGAGC AACTGCTGAC AAGACTGCTG GGCGCATCAC CCGACACTCG GGGGGTCAAA
GTGACGACGG TAGATAGCCT GGCATTTCAC TACTTCGCCA GGGGGTGGGG ATCGCCCAGG
CTTGCTACCG AAGGGCAGGC GACCGCGCTG CTCATGGATG CGCTCGCCAA TGCCGATATT
CCTGCCGCCG ACGCCCATGA GCGTCGCGCA GCGCTGGAAC GACTCGGCGC CGAATATCTG
CTCCAGGAAT TTCTGCACGT CATCGAAGCG CGAAATATCA ACAGCCTGGA AGAATACCTC
GCCGTCGAGC GCCACGGACG GCGAATGCCG CTCAAACCGG CGCTCCGTGA GGCGCTCTGG
GCAATCTATG TATCCTGGCG CGACCTGATG CGCGTCAAAG GGTTGGTGTT GAACGAACAG
GTGCGACGCG GCGCAATGGA GTTCGCCGCC ACGCTGTCGC CCAAGCCCTA TCAGGCGCTG
GTGATCGACG AAGCGCAGGA CCTGTCGCCG GCGGCGCTGC GCTTTTTGTT GAACCTGGTG
GAAACGCCGG AGCATGTATA CCTGACGGCT GACGCATCAC AGTCGATCTA CCAGTGCGGT
TTTAGCTGGA AGCAGGTACA CCGGACGCTC GCCATGGCCG GTCGAACGAT CCTGTTGAAA
CAAAATTTCC GCAACACCGC ACAAATCCTG GCAGCCTGCG CCGGCATTCT GGCAGGCAGC
AGCGCCGGCG AGGAAGAGAG CGTCCGGCAA ATTCCATCAG CGCATCACGG CGATCCGCCA
CTCCTCCGAC TGGTGAACAA CGACTCGGAT GAATCTGAAG CGATCCGTGA TTTCTTCCTC
GAAGCGGCGC GGCGTTACCG CCTGCCCACT CATAGCGGCG CCGTGCTGTG CACCAGCAGG
CGCGCAGGGG AGGACATCGC CCTCCGCCTG ACGCGGTTGG GCATGCCCGC CGCATTTCAG
TCGAGCAAAG ATGTTGACAT CACGACGCCG AAGGTCAAGG TGCTGACGCT CCATTCCGCC
AAAGGGCTGG AGTTCCCATT CGTGGCAGTC GTGGGGCTGG ACGAAGGACG GTTCCCACGC
ATCAGCGCAG ACCTGCCAGT CGAAGAAGCG CAAATGCAGG AGGACGAGCA ACGACGTCTC
TTCTTTGTTG GCTGCTCACG CGCCATGCGC GCGCTCCTCG TCTGCGGATC GCAGGCAACG
CCGTCACCAT TTCTGACGCC ACTGCAACCG CCGGTTTGGC GGAGGGAGGT TTGA
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| Protein sequence | MARFELSFTP TFYYESLDLP RHVSKTITRK LETIADDPYS ARGDAKKLKG YDNVYRVRVG
DYRICYCIGK GWVKLLSVRK RDERTYEDDL PDIAPPALPP DPVTLTPRAH GAVEEQFVLS
KPPMDAALLS SALPPSRPLP FPITEDMLER WRIPAQYRTI TLTARTEDDL LNLPIPERHL
TLLLDNLFPR SLDAIAAQPE FVLSTPVDIE RFAEEDLTGF LLRLTPDQER LVNQDRRGPI
LVRGGPGTGK STLALYRVQR LLEQGVTSVL FTTYTNALVA YSEQLLTRLL GASPDTRGVK
VTTVDSLAFH YFARGWGSPR LATEGQATAL LMDALANADI PAADAHERRA ALERLGAEYL
LQEFLHVIEA RNINSLEEYL AVERHGRRMP LKPALREALW AIYVSWRDLM RVKGLVLNEQ
VRRGAMEFAA TLSPKPYQAL VIDEAQDLSP AALRFLLNLV ETPEHVYLTA DASQSIYQCG
FSWKQVHRTL AMAGRTILLK QNFRNTAQIL AACAGILAGS SAGEEESVRQ IPSAHHGDPP
LLRLVNNDSD ESEAIRDFFL EAARRYRLPT HSGAVLCTSR RAGEDIALRL TRLGMPAAFQ
SSKDVDITTP KVKVLTLHSA KGLEFPFVAV VGLDEGRFPR ISADLPVEEA QMQEDEQRRL
FFVGCSRAMR ALLVCGSQAT PSPFLTPLQP PVWRREV
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