Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4060 |
Symbol | |
ID | 5541571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5269613 |
End bp | 5270596 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640896172 |
Product | UbiA prenyltransferase |
Protein accession | YP_001434110 |
Protein GI | 156743981 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000422239 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0105884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAGA TTGCTGAGAT CGAACTGACA CGCGCGCGCG GCGGCGCCAT GCTCATTGAA CTGTTGCGCG CCATGCGCCC AAAAGAATGG ATCAAGAACA CGTTCGTGTT CGCTGCGATT GTGTTTTCCC AGCAGCGACT GTGGATGCAC GTGGATGCTG TACTGACCGT AACTCTCGCA TTCGCGCTTT TTTGCATGGT TGCCAGTGCA ATCTACCTGC TCAACGATCT GGTCGATATG GAAAAAGACC GGGCGCATCC GAAGAAACGC AACCGTCCGC TGGCATCGGG GCGGCTCAGC CCACGCATCG CGGCATTGAC CGCAGTGGCG CTGGTCGTTG TCGCGCTGCC GCTCAGCGTG GCGCTCGATC TGAGTTATGC ACCGCCTGGC GATAGCACAA CCTGGTTTGG CTACAATTAT GACTTCCCGG CTGCTTTGTT TACCTATGCG ATCATCCAGG GAGTGGCATA TTCCTACTAC TTTAAGCATG TCGTGATTAT GGATATTTTC ACCATTGCCG CAGGTTTTGT GCTCCGCGCC GTAGCGGGAG CAATGGTCAT CGACATTGCC ATTACGCCCT GGTTGCTCAT CTGCATGGGA TTGCTCGCCC TCTTCCTGGG TCTGGCAAAG CGTCGCGCCG AGCTGGTGCT GCTGGAGAAC GGCGCCGGCG CGCACCGACG TATTCTCGAT GAGTATTCGC TGCCGCTCCT CGACCAGATG ATGTCGATCG TCACTGCCGC CACAATCATC GCGTATACGC TGTTTACGTC AACTGCCGAA ACATTGCCGC ACGAACCGTT CCCGGTGATG ATGATCACGG TGCCGTTCGT CGTCTACGCT ATCTTTCGCT ACCTCTATCT GATCTACAAA CAGGATGGCG GCGGCAGCCC TGCCGATCTC GTGTTGAGAG ACATGCCGCT TGCCTCATGC ATTGTGCTGT GGGGACTGAC CTCGGTGGCG ATCCTGGCGG CGTTTGCGTC GTGA
|
Protein sequence | MEQIAEIELT RARGGAMLIE LLRAMRPKEW IKNTFVFAAI VFSQQRLWMH VDAVLTVTLA FALFCMVASA IYLLNDLVDM EKDRAHPKKR NRPLASGRLS PRIAALTAVA LVVVALPLSV ALDLSYAPPG DSTTWFGYNY DFPAALFTYA IIQGVAYSYY FKHVVIMDIF TIAAGFVLRA VAGAMVIDIA ITPWLLICMG LLALFLGLAK RRAELVLLEN GAGAHRRILD EYSLPLLDQM MSIVTAATII AYTLFTSTAE TLPHEPFPVM MITVPFVVYA IFRYLYLIYK QDGGGSPADL VLRDMPLASC IVLWGLTSVA ILAAFAS
|
| |