| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4052 |
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| Symbol | |
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| ID | 5541563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5256431 |
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| End bp | 5260009 |
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| Gene Length | 3579 bp |
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| Protein Length | 1192 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896165 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein |
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| Protein accession | YP_001434103 |
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| Protein GI | 156743974 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0539236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGA GTTGGGTCAC GCTGGAAGGC AATGAGGCTG CCGCCAGCAT TGCGTACCGC
TTGAGCGAAG TCATTGCGAT CTATCCCATC ACACCCTCAA CGCCCATGGG CGAACTGGCG
GATGCCTGGG CTGCCGCCGG AAAGCCCAAT CTGTGGGGCA CGACGCCGCT AGTCATTGAG
ATGCAGTCGG AAGGCGGCGC GGCCGGTGCA TGCCATGGGG CGTTGCAGCG CGGCGCGCTG
ACAACGACGT TCACCGCATC GCAGGGGTTG TTGTTGATGA TTCCAAATAT GTATAAGATC
GCCGGGGAAC TGACGCCGAC GGTCTTTCAT ATTGCGGCGC GCTCAATTGC GGCGCACGCG
CTGTCGATCT TCGGCGATCA TCAGGATGTG ATGGCAGTGC GGCAGACCGG TTGGGCGCTG
CTGGCATCGT CGTCGGTGCA GGAAGCGCAC GACCTGGCGC TGGTGGCGCA TGCCGCGACG
CTGAGGGCGC GGGTGCCGTT CCTTCACTTC TTCGATGGCT TTCGCACGTC GCACGAGATC
AATAAGATCG AGCAACTGAC GGATGACGAC CTGCATGCGA TGATCGATCC CTCGTTGATC
GAAGCGCATC GCTTGCGAGC GCTCAGCCCT GATCGTCCGG TTATCCGCGG TACGGCGCAG
AACCCCGATG TCTACTTCCA GGCGCGCGAG ACGGTCAACC CCTTCTACGC CGCCACACCC
GGCATCGTCC AGGAGACGAT GGAAAAGTTC ACGCAGTTGA CGGGGCGTGC CTATCATCTG
TTCGATTACA CCGGCGCGTC GGACGCCGAG CGCGTGATCG TGATCATGGG GTCTGGCGCA
GAAACAGCGC GCGAGACGGC AAAGTTTCTG GCAGAGCGCG GCGAGAAGGT CGGCGTGGTG
ACGGTGCGCC TCTATCGCCC GTTTTCGGTG GCGCACTTCG TGGCGGCATT GCCGACGACA
GTGCAGCGCA TCGCAGTGCT CGACCGCACG AAGGAGCCTG GGAGCAGCGG TGAGCCGCTC
TATCTCGATG TGGTGACGGC AATGGCGGAG AGTGGACGCC ATCTGCCGGT GATCGGCGGT
CGGTACGGTT TGTCGTCGAA AGAATTCACT CCCGCGATGG CGAAGGCAGT CTTCGACGAA
CTGGCGAAGG ATCAACCGAA GAACCATTTC ACTGTGGGCA TTGTCGATGA TGTGGGATAC
ACCAGCCTGG ATTACGATCC TTCGTTCTCA ATCGAGTCGC CGCGCACGGT GCGCTGCCTG
TTCTACGGTC TTGGCGCGGA TGGCACGGTC GGCGCCAACA AGAACTCGAT CAAGATCATC
GGCGAAGAAA CCAATAACTA CGCGCAGGGA TACTTCGTCT ACGACTCGAA GAAATCCGGT
TCGATGACCG TCTCACATCT GCGCTTCGGT CCCGAACCCA TCCATGCGCC CTATCTGGTT
GATCGAGCGA ACTTTGTCGC CTGCCATCAG TTCTCGTTCC TGGAGCGCAT TGATGTGCTC
AAGGCGGCGG AGCCGGGCGC GGTCTTCCTG CTCAACAGCA TGTATGGACC GGACGAGGTC
TGGTATCATC TGCCGCGTGA AGTGCAGGAC GATATTGTGC GCAAACAACT GAAGTTCTAC
GTGATCGACG GTGACCGGGT GGCGAAAGAG AGCGGCATGG GGCGCCGGGT GAATACCGTG
ATGCAGACGG CGTTCTTTGC GATCTCCGGG GTTTTGCCGC GTGAGGATGC TATTGCGGAG
ATCAAGCGCA GCATCAAGAA GACGTATGGT AAGCGCGGCG AGGCAGTGGT GCAGCAGAAC
TATCGCGCAG TCGATGCCGC CCTTGCACGC CTGTACGAAG TCGATGTTGA GAAGTTCGCC
GGGTTCCGCT CACCGAAGAC GCGCCGACCG CCGGTGCCCG ACCATGCGCC CGACTTCGTC
AAAGAGGTGC TTGGTCCGAT GATTGCCTAC GAAGGCGACT CACTGCCGGT GAGCAAACTG
CCGGTCGATG GGACCTTCCC CACCGGCACG GCAGCCTGGG AGAAGCGCAC GATTGCGCTG
GAGGTGCCGA TCTGGGAGCC GGATATTTGC ATTCAGTGTG GCAAGTGTGC ATATGTTTGC
CCGCATGCCG TCATTCGCAC CAAAGTGTAC GAACCGGCGC TGCTCGAAGG TGCGCCCGAA
ACCTTCCTCA GCAGTGAGGC GAGATTCAAG GAGTTCCCCG GATACAAGTA CACGCTGGCG
ATTTCTCCCG AAGATTGCAC CGGTTGCGGT TTGTGCGTCG AAGTCTGTCC GGCAAAGGAT
AAGCGGCAGG TAGGGCGCAA GGCGATCAAT ATGAAGCCGC TGGTCGAGGT GCGTGAGCGT
GAAGTGCGCA ATTGGGAGTT CTTCCTGACT ATCCCCGATA TTCCACGCAC TGCCATGCAT
CCGGGTTCGA TCAAGAACTC ACAGTTGCTC CTGCCACTGT TCGAGTTCTC CGGCGCATGT
GCGGGGTGCG GCGAGACACC GTACATCAAA CTGTTGACCC AACTGTTCGG CGATCGCCTG
TTGATTGCCA ATGCAACCGG TTGTTCATCG ATCTACGGCG GCAACCTGCC GACGACGCCG
TACACGAAGA ATGCTGAGGG GCGTGGTCCT GCGTGGAGCA ACTCACTCTT CGAGGATAAT
GCCGAGTTCG GGCTTGGCAT GCGTCTGGCG CTCGACCAGC AGATTGCGCA CGTGCGTGAA
CTGCTGCCGC TGTTCGCGCC GGTCGTCGGG CAGGACCTGG TAGACGCGCT GTTGAACGCC
GACCAGAGCA CCGAGGCGGG GATCGCGGCG CAGCGCGAGC GCGTTGAGTT GCTCAAGCAG
CGCCTGCACA CGCTCGACCG CAGTCAGTTC CCGGATGTGG TCGAGCGCGA GCACGAACTT
CTCAGCCTGG CGGATGTCCT GGTCCGAAAG AGCGTCTGGA TCGTCGGCGG CGATGGTTGG
GCATACGACA TTGGCTATGG CGGGCTCGAC CATGTGCTGG CATCGGGGTA CAACGTCAAT
GTATTGGTGC TCGACACTGA GGTGTACTCG AACACCGGCG GGCAGGCGTC GAAAGCGACG
CCGATCGGCG CAGTCGCTAA GTTTGCCGCC AAAGGTAAAT CGGCGCCGAA GAAGGACCTT
GGTCTCATTG CGATGGCATA CGGCAACATC TACGTGGCAC GGGTGGCGAT GGGCGCCGAT
GATGTGCAGA CGCTGCGCGC TTTCATGGAG GCGGAAGCGT ATGAAGGACC ATCCCTGATC
ATTGCGTACT CGCACTGCAT CGCCCACGGC ATCGATATGC GCAAAGGTCT CGAGCAGCAG
AAACTGGCGG TTCAGACCGG TTACTGGCCG CTGTACCGCT ACAACCCGAT GCTGGCAGCC
GAAGGGAAGA ATCCGTTGAT TATCGACTCG AAAGACCCGA CGCTGCCGCT TGAGAAGTTT
GTCTACAACG AGACACGCTA TCGCATGCTG ATGCAGAGCG ACCCGCATCG CGCGGAGGAT
CTGCTGCATA AGGCGGAGGC GTCGGTGCGT GCGCGCTGGC AGCATTACAA GGAACTGGCA
ACGCTCAGCG AGGTGAAGGC GGAGCACGAT GGGCATTGA
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| Protein sequence | MKRSWVTLEG NEAAASIAYR LSEVIAIYPI TPSTPMGELA DAWAAAGKPN LWGTTPLVIE
MQSEGGAAGA CHGALQRGAL TTTFTASQGL LLMIPNMYKI AGELTPTVFH IAARSIAAHA
LSIFGDHQDV MAVRQTGWAL LASSSVQEAH DLALVAHAAT LRARVPFLHF FDGFRTSHEI
NKIEQLTDDD LHAMIDPSLI EAHRLRALSP DRPVIRGTAQ NPDVYFQARE TVNPFYAATP
GIVQETMEKF TQLTGRAYHL FDYTGASDAE RVIVIMGSGA ETARETAKFL AERGEKVGVV
TVRLYRPFSV AHFVAALPTT VQRIAVLDRT KEPGSSGEPL YLDVVTAMAE SGRHLPVIGG
RYGLSSKEFT PAMAKAVFDE LAKDQPKNHF TVGIVDDVGY TSLDYDPSFS IESPRTVRCL
FYGLGADGTV GANKNSIKII GEETNNYAQG YFVYDSKKSG SMTVSHLRFG PEPIHAPYLV
DRANFVACHQ FSFLERIDVL KAAEPGAVFL LNSMYGPDEV WYHLPREVQD DIVRKQLKFY
VIDGDRVAKE SGMGRRVNTV MQTAFFAISG VLPREDAIAE IKRSIKKTYG KRGEAVVQQN
YRAVDAALAR LYEVDVEKFA GFRSPKTRRP PVPDHAPDFV KEVLGPMIAY EGDSLPVSKL
PVDGTFPTGT AAWEKRTIAL EVPIWEPDIC IQCGKCAYVC PHAVIRTKVY EPALLEGAPE
TFLSSEARFK EFPGYKYTLA ISPEDCTGCG LCVEVCPAKD KRQVGRKAIN MKPLVEVRER
EVRNWEFFLT IPDIPRTAMH PGSIKNSQLL LPLFEFSGAC AGCGETPYIK LLTQLFGDRL
LIANATGCSS IYGGNLPTTP YTKNAEGRGP AWSNSLFEDN AEFGLGMRLA LDQQIAHVRE
LLPLFAPVVG QDLVDALLNA DQSTEAGIAA QRERVELLKQ RLHTLDRSQF PDVVEREHEL
LSLADVLVRK SVWIVGGDGW AYDIGYGGLD HVLASGYNVN VLVLDTEVYS NTGGQASKAT
PIGAVAKFAA KGKSAPKKDL GLIAMAYGNI YVARVAMGAD DVQTLRAFME AEAYEGPSLI
IAYSHCIAHG IDMRKGLEQQ KLAVQTGYWP LYRYNPMLAA EGKNPLIIDS KDPTLPLEKF
VYNETRYRML MQSDPHRAED LLHKAEASVR ARWQHYKELA TLSEVKAEHD GH
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