| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4047 |
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| Symbol | |
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| ID | 5541558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5250349 |
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| End bp | 5252997 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640896160 |
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| Product | hypothetical protein |
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| Protein accession | YP_001434098 |
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| Protein GI | 156743969 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.353342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0213567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAC GTTTTGCCCT CGTTCTTGCA CTGGTCATCG GTAGTGTGTG CGGTGCGGCG
GCTTCTGCCG CTGCCGGTGC GATTGCCGTT GTTCGTGGTG GTGACGAAAC GCTGGTTGTC
CAGGCGACAA CGAGCGGAAC GCGGATCATC TGGCGTCCTC CGGCGTCCGA TCCGTCTCTG
CATGTCGAAC CGGTTCTGGT CGCGTTGCGC CTCACCGGTG ATGCGACTAT CGCGCCTCGC
CTGCTGGCGC TCGATGATAC GCCGTGGACG GGCGACTTCG ACGATCCGCC AGGTGCGCCG
GTATTTGTGC TGCGCGAGGC GCGTCAGCGC GGTGAGCGTC TGGCTGTGCT GGCACTCAGT
CCGGTCTATC TGCGCGAGGG GCAGGCGCGC GCGGTGCGCA CGCTCGAAGC GCTGGTCGAG
GGCGCGGCGC CGCTGAGTGA CTCACCTGTT CCCGTCGCTG CATCATCACT TGCAGCAGGA
GAGCCCGCTT CTGGGCGTCC GCCAGCGTTT CCGGCGCCTC CGGCGCTGCG GGTGCGGGTG
GACCGTGCAG GTGTGCAGGT CATCCCCGTC AGTTCTCTGA GTTCGGCGAT CGCCGGAGCG
CCGGAGCGCC TCAAACTGAC CCGCGCCGGG GTGGAAATCC CGCTCGAACT GCGCGACGCG
AGCGGTAATG GCGTCTGGGG CGACCCAGAC GACGAACTAC GCTTTTATGC GCCGCCGCCG
GGTAACCGCT GGAACCGCAG CGATACGTAT TGGATCACGC TCGAAGCAGG ATCGCGATTG
CGCATTGCGT CCCGCGCGGT GAGTGCGCCA TCGGGCGAAG CGCCATCCAC TGCGCTGGAA
CGGGGTGTTG TGCGCGGAAC GGCCTACTAC GACTCGCGGC GCCCTGGCAG TGATGGCGAT
CACTGGTTTG CGAAGCTGCT GCGCGCTGAG GCGGGACAAC CGGCGGATGA CCAGGCGATG
CTGTCCGTTC CGCTCACGAC GACCCTTCCA ACCGCAACTG GAACGGTGAC GCTGACGGTT
GCGGTCCACG CGCAATCGGA TGGTGCGCGT CGCCTGACCG CCGCCATCGA GTCGAGCAGC
GGATCGCCGG TTGAGTGGAG CGGCAGCGGA GATGCACTCC TGACGCTCAG TGTAGCCGGT
AGCCCTGCTG CCACGACGCA AGTGCGCCTG ACGCTGACCG CTGTCGTCGG GTATGCACAG
GTGGCCGTGG ATACGGTCGA ATGGATGCGA CCGGTGCAGT TGCAGTTCGG CGGGAAAGGC
GCTGTCTTTC AGGGCGCGCC GGATCAGCGC GCCTACTGGT TGACTGGTGC GCCTTCCGGG
TTCGATCTCT ACGATATTAC CGATCCTGTG ATGCCGACGC GGTTACAGAT GCCCGCCGGT
TCCGCATTCG AGGATAGTGC GCCGGGGAAA TTGTATCTGC TGACCGGCGT CGGCACACGA
CACACGCCGA CGGTCGAGCC GTTCACGCCG CCAACGCTGC CAACCGATGC CAGTGTGCTG
TACATCGCTC CCGCGCCGTT CCATGCTGCG CTGACGCCGC TCGTGGACCT GCGGCGCGCG
CAGGGGTACA GCGTGGCGGT TGTGGATGTG CAGCACCTCT ACGACGGATG GAGTGACGGT
CAGGTCGATC CTGATGCGAT CCGCGCCTTT CTGCAATTTG CGCGTCCCCA GGCAGTGACG
CTGGTTGGCG ACGGGAGTTC TGATCCGTTC GACTATACCG ACCGTGGTGC GAAGAATGTC
AACCTGATCC CGCCATATCT GGCGATGGTC GATCCGTGGC TGGGCGAAAC CGCCTGCGAA
ACGTGTTACG CGCAACTGGA CGGCGAGCGA CCGACCGATG ACCGGCTGCC GGATGTCTGG
CTTGGGCGGC TGCCGGCAAA GAGCGTTGCT GAAGTGCAGT TGCTGGTGGC CAAGATCATC
AGGTACGAAA CGTCTCCATC CGGCGGCGCA TGGCGCAGCC GCGCGCTCTA CCTGGCGGAT
GATGCGGACA CCAGCGGCGA TTTTGTGGCT CAGGCGGAAG CGAGCATTGC GCTGCACCCG
GTAGGCGTCC AGATCGGTCG GGTGTTTTTT GGCAACGGTG CGGGAGCGTT TCCAACCGCT
GCCGCAGCGC GGACTGCTAC GCGGACACAG TTCGACAACG GCGCGGCGGC GGTGGTCTAC
ATCGGGCACG CGCATCAACA GCAGTGGGCG GTGACGGAGT TGAGCGCGCC GGAGAACTGG
CTACTCCATC GAAATGATGT CGCGGCGCTG ACCAATGGCG AGCGCCTGCC AGTGGTACTG
GCGCTCACCT GCCTGAGCAG CGCCTTTCAG TGGCCCTCAT ACGTGGGCAT GACTGTTGAT
GAGGCGCTGC TGCTGCACGA GAAGGGCGGC GCTGTGGCAG TCTGGGGACC GACGGGGCTG
GGCGTGTCCT ACGGGCACGA CAAACTGCAA CGGGGATTCT TCCGCGCCCT CTGGTCACCC
GCGCCAGATG TGGGGATTGA ACGCGCCGTG CCGCTTGGCG CGTTGACCAG CGCCGGGTTC
CGTGACCTCT TCACCGGAAG CGCCTGTTGT CAGGAAACGA TATTCACCTA TGCGCTGCTG
GGCGACCCGC TCACGCCGCT GCGGATGACG GCGGGGACGC GTGTGATGTT GCCGCTGGTG
CAGCGGTAG
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| Protein sequence | MMTRFALVLA LVIGSVCGAA ASAAAGAIAV VRGGDETLVV QATTSGTRII WRPPASDPSL
HVEPVLVALR LTGDATIAPR LLALDDTPWT GDFDDPPGAP VFVLREARQR GERLAVLALS
PVYLREGQAR AVRTLEALVE GAAPLSDSPV PVAASSLAAG EPASGRPPAF PAPPALRVRV
DRAGVQVIPV SSLSSAIAGA PERLKLTRAG VEIPLELRDA SGNGVWGDPD DELRFYAPPP
GNRWNRSDTY WITLEAGSRL RIASRAVSAP SGEAPSTALE RGVVRGTAYY DSRRPGSDGD
HWFAKLLRAE AGQPADDQAM LSVPLTTTLP TATGTVTLTV AVHAQSDGAR RLTAAIESSS
GSPVEWSGSG DALLTLSVAG SPAATTQVRL TLTAVVGYAQ VAVDTVEWMR PVQLQFGGKG
AVFQGAPDQR AYWLTGAPSG FDLYDITDPV MPTRLQMPAG SAFEDSAPGK LYLLTGVGTR
HTPTVEPFTP PTLPTDASVL YIAPAPFHAA LTPLVDLRRA QGYSVAVVDV QHLYDGWSDG
QVDPDAIRAF LQFARPQAVT LVGDGSSDPF DYTDRGAKNV NLIPPYLAMV DPWLGETACE
TCYAQLDGER PTDDRLPDVW LGRLPAKSVA EVQLLVAKII RYETSPSGGA WRSRALYLAD
DADTSGDFVA QAEASIALHP VGVQIGRVFF GNGAGAFPTA AAARTATRTQ FDNGAAAVVY
IGHAHQQQWA VTELSAPENW LLHRNDVAAL TNGERLPVVL ALTCLSSAFQ WPSYVGMTVD
EALLLHEKGG AVAVWGPTGL GVSYGHDKLQ RGFFRALWSP APDVGIERAV PLGALTSAGF
RDLFTGSACC QETIFTYALL GDPLTPLRMT AGTRVMLPLV QR
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