| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4031 |
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| Symbol | rpsL |
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| ID | 5541541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5230049 |
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| End bp | 5230483 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896143 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001434082 |
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| Protein GI | 156743953 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000129313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000334928 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCGACAA TCAACCAGTT GGTTCGAAAG CCGCGCAAGC GGGTCACAAA GAAAGTCAAG
GCGCCAGCGT TACGATTCAG CCTGAATGTG TTGAAGGGCA AACTGACGCG CGGCAAAGGG
TCGCCGTTCA AACGCGGCGT CTGCACGCAA GTCAGGACGA TGACGCCCAA AAAGCCCAAC
TCGGCGCTGC GCAAGATCGC GCGCGTCCGG CTTTCGAATG GCATGGAAGT CACGGCCTAC
ATCCCAGGCG AAGGGCACAA CCTGCAAGAA CACTCTGTGG TATTGATCCG TGGCGGGCGC
GTGAAGGACT TGCCCGGCGT GCGCTACCAC ATCGTGCGCG GCACGCTCGA CGCGCAGGGG
GTTGCGAACC GGAAGCAGGG TCGTTCGAAG TACGGTACGA AGAAAGCCAG TGCGGTTCCG
GCAAAGAAGA AGTAA
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| Protein sequence | MPTINQLVRK PRKRVTKKVK APALRFSLNV LKGKLTRGKG SPFKRGVCTQ VRTMTPKKPN
SALRKIARVR LSNGMEVTAY IPGEGHNLQE HSVVLIRGGR VKDLPGVRYH IVRGTLDAQG
VANRKQGRSK YGTKKASAVP AKKK
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