Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4023 |
Symbol | rplB |
ID | 5541533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5223123 |
End bp | 5223950 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896135 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001434074 |
Protein GI | 156743945 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.796821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000688583 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTGTGA GAAAATACAA ACCAACCTCG GCAGGTCGCC GCAATATGTC GGTCTCGACC TTTGAGGAGA TTACCAAGAA GGAGCCGGAG CGATCATTGC TCGAGCCGCT GCGGAAGAAA GCCGGGCGCA ATGTCTATGG GCGCATTACG GTGCGTCATC GCGGCGGCGG TCATAAGCGC CATTATCGCA AGATCGACTT CAAGCGCGAT AAGGTCGGTA TTCCGGCAAA AGTGGCGGCG ATTGAGTACG ATCCGAACCG ATCTGCGCGT ATCGCGCTGC TTCATTATGT CGATGGCGAG AAACGCTACA TCCTCGCGCC GCTCGGCTTG AACGTCGGCG ATACGGTCAT GAGCGGGCCT GCCGCCGATA TCCGCGTCGG CAACGCCTTG CCGCTGCGCC AGATACCGCT TGGGACGCAG GTGCACAACA TCGAGCTCGA AAAAGGACGC GGCGGCGTGA TGGTGCGGAG CGCCGGGGCA GCGGCTCAGT TGATGGCGAA AGAAGGGAAC TACGCCACAC TGCGTATGCC ATCGGGCGAG GTGCGCCGGG TGTTCATCGA GTGTATGGCG ACGATTGGGC AGGTTGGCAA TCTGGATCAC CAGAATGTGC GCCTGGGGAA AGCGGGGCGG AAACGCTGGC TTGGGCGGCG CCCCGAAGTG CGTGGCGCGG CAATGAACCC GCGTGACCAT CCCCATGGCG GCGGTGAAGG GCGCGCACCG CGTGGTATGC CGACCCCGAA AACTAAATGG GGGAAACCGG CGCGTGGCGT GAAGACCCGC CATAACCCGC GGACCGATGC CTTCATCATC CGCCGTCGAA CGCGGTAA
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Protein sequence | MPVRKYKPTS AGRRNMSVST FEEITKKEPE RSLLEPLRKK AGRNVYGRIT VRHRGGGHKR HYRKIDFKRD KVGIPAKVAA IEYDPNRSAR IALLHYVDGE KRYILAPLGL NVGDTVMSGP AADIRVGNAL PLRQIPLGTQ VHNIELEKGR GGVMVRSAGA AAQLMAKEGN YATLRMPSGE VRRVFIECMA TIGQVGNLDH QNVRLGKAGR KRWLGRRPEV RGAAMNPRDH PHGGGEGRAP RGMPTPKTKW GKPARGVKTR HNPRTDAFII RRRTR
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