| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4022 |
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| Symbol | rpsS |
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| ID | 5541532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5222811 |
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| End bp | 5223098 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896134 |
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| Product | 30S ribosomal protein S19 |
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| Protein accession | YP_001434073 |
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| Protein GI | 156743944 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0185] Ribosomal protein S19 |
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| TIGRFAM ID | [TIGR01050] ribosomal protein S19, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.717988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000485262 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCGCGTT CTTCTAAAAA AGGTCCATAT GTCGATGTGC GGCTGCTCGG TCGTATTGAG
GAACTGAACC GGGCGAATGA AAAGCGAGTG CTGCGCACAT GGTCGCGCGA CTCGACGATC
TTCCCGCAGA TGGTCGGGCA CACCATCGCC GTCCACGATG GACGGCGCCA CGTGCCGGTG
TATATCACCG AAAATATGGT CGGGCACAAA CTGGGCGAAT TCGCCCCAAC CCGGCTGTTC
CGCGGTCATG GCGGCAAGAA GGTGGATAAG CGCGGCAAAA TGAAGTGA
|
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| Protein sequence | MSRSSKKGPY VDVRLLGRIE ELNRANEKRV LRTWSRDSTI FPQMVGHTIA VHDGRRHVPV
YITENMVGHK LGEFAPTRLF RGHGGKKVDK RGKMK
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