| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4019 |
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| Symbol | rplP |
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| ID | 5541529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5221169 |
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| End bp | 5221594 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896131 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001434070 |
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| Protein GI | 156743941 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.261659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000510081 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTGATGC CAAAGCGTGT CAAGTATCGG AAACAGCAGC GCGGCCACAA TCGCGGGATG
GCGCATCGCG GGAATACGGT CGCTTTTGGC GAGTATGGCT TGATGGCCAT CGAAGCGACA
TGGATGACGA GCCGTCAGAT CGAAGCGGCG CGGCGCGCTA TCAGCCATCA CGTCAAGCGC
GGCGGCAAAA TCTGGATTCG CATCTTTCCA GATAAGCCGG TGACCGCCAA GCCCGCTGAA
ACGCGCATGG GATCGGGGAA GGGCGCCGTT GATCACTATG TGGCTGTGAT CAAACCGGGC
CGCATCCTGT TCGAACTGGC CGGGGTGCGC CCCGAAATCG CGCACGAAGC GCTTGAACGC
GCTGCGCAGA AATTGCCGAT CAAATGCAAA ATCGTGGCGC GTGAGGATCT GGAGGGCGCA
GCATGA
|
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| Protein sequence | MLMPKRVKYR KQQRGHNRGM AHRGNTVAFG EYGLMAIEAT WMTSRQIEAA RRAISHHVKR
GGKIWIRIFP DKPVTAKPAE TRMGSGKGAV DHYVAVIKPG RILFELAGVR PEIAHEALER
AAQKLPIKCK IVAREDLEGA A
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