| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4014 |
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| Symbol | rplE |
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| ID | 5541524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5219383 |
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| End bp | 5219925 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896126 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001434065 |
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| Protein GI | 156743936 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00014513 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000181617 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTACCAC GCCTCAAAGA AAAATATCAG ACCGAAGTCG TGCCGGCGCT GATGCAGGAG
TTTCAGTATC GCTCGGTGAT GCAGGCGCCA CGGTTGGAAA AGATCGTCCT GAATATCGGG
CTTGGCGAGG CGATCCAGAA CTCCAAGGCG CTCGATGCTG CAACGTCCGA TCTTGCGGCA
ATCGCCGGTC AGAAACCGGT TATTACGCGC GCCAGGAAGT CGATTGCAGC ATTCAAAGTG
CGCCAGGGGA TGCCAATCGG CGTGATGGTG ACGTTGCGAG GTCCGCGCAT GTGGTCGTTC
TTCGACCGGT TGGTGAACCT GGTGCTGCCA CGCCTGCGCG ATTTTCGCGG CGTCAGTCGC
CGTTCGTTCG ATGGACGCGG CAATTACTCG CTCGGTCTGC GCGAGCAGAT CGTGTTCCCG
GAGATTGATT ACGATAAAGT CGATAAACTC CGGGGACTCG AAGTGGTGAT TGTGACCACG
GCGCCCGACG ACGAACAGGG CTATGCGCTG CTTAAGCGCC TTGGCATGCC GTTTCGCGAT
TAG
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| Protein sequence | MVPRLKEKYQ TEVVPALMQE FQYRSVMQAP RLEKIVLNIG LGEAIQNSKA LDAATSDLAA
IAGQKPVITR ARKSIAAFKV RQGMPIGVMV TLRGPRMWSF FDRLVNLVLP RLRDFRGVSR
RSFDGRGNYS LGLREQIVFP EIDYDKVDKL RGLEVVIVTT APDDEQGYAL LKRLGMPFRD
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