| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4012 |
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| Symbol | rpsH |
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| ID | 5541522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5218679 |
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| End bp | 5219077 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896124 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_001434063 |
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| Protein GI | 156743934 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000425242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000631247 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAGTGTGA ATGATCCGAT TGCCGATATG CTGACCCGCA TCCGGAATGC GTGCATGGCC
CGCCACGCAA CGGTGTCGAT TCCGTCGTCG AAAATGAAAC TGGCGATTGC GCAGATTCTC
AAGCGCGAAG GTTTCATCCA AGACTTCACG GTGCAGGAAG GCAAACCGTA CAGTACTATT
GTCATTACTT TGAAGTATAC CCCTGATCGA CGACCGGTCA TTACCGGGCT GAAGCGGGTG
AGCAAGCCAG GGTTGCGCAT CTACACCAAA CGCGCTGATA TTCCGCGGGT GCGCGGTGGG
TTGGGGTTGA GCATTCTCTC GACACCTCGC GGTGTGATGG CGGGACATGA GGCCTGGCAA
CAGCGCGTCG GCGGTGAGGT TCTCTGTTAC GTCTGGTGA
|
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| Protein sequence | MSVNDPIADM LTRIRNACMA RHATVSIPSS KMKLAIAQIL KREGFIQDFT VQEGKPYSTI
VITLKYTPDR RPVITGLKRV SKPGLRIYTK RADIPRVRGG LGLSILSTPR GVMAGHEAWQ
QRVGGEVLCY VW
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