Gene Rcas_3961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3961 
Symbol 
ID5541467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5167200 
End bp5167541 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content50% 
IMG OID640896069 
Producthypothetical protein 
Protein accessionYP_001434012 
Protein GI156743883 
COG category[S] Function unknown 
COG ID[COG2361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.626925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.333719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGAG ATGATGCTTA TTTGCTGGAC ATGTTGATTG CGGCCAGGAT AGCGCGTCAG 
TTCAGCGAGG AACTTACGTG GGAGGATTTT CGACGTAATT CCCTCTACCA GCACGCCATT
GCAAAGGCTC TGGAGAACAT CGGTGAAGCC GCGCGTAAAA TCTCAGACGA GACGAAAATG
GCTCATCCCG AAATCCCCTG GTCTCAGATT ATTGCATTAC GGCATCGCAT CGTGCATGAT
TACTTCCGTC TTGATCTGTT CAAAGTGTGG GATATTGTGC AACACGATGT TCCTGACTTG
ATCAGGATGC TTGAACCTCT GGTTCCACCG GAAGAGCCGT AA
 
Protein sequence
MWRDDAYLLD MLIAARIARQ FSEELTWEDF RRNSLYQHAI AKALENIGEA ARKISDETKM 
AHPEIPWSQI IALRHRIVHD YFRLDLFKVW DIVQHDVPDL IRMLEPLVPP EEP