| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3949 |
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| Symbol | |
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| ID | 5541455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5154091 |
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| End bp | 5155542 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896057 |
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| Product | glutamyl-tRNA(Gln) amidotransferase, B subunit |
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| Protein accession | YP_001434000 |
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| Protein GI | 156743871 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.404277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.355186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATC TTGTGACCAT TGGGCTTGAA ATCCACGCGC AGATTCTGAC GCGCTCGAAA
ATGTTCTGCG GTTGCAGCGC CGATTATGCA CATGCGCCAC CCAATACGCA TGTTTGCCCG
GTGTGCATGG GGTTGCCTGG TGCGCTGCCG GTGCCGAACC GGCGCGCTAT CGAACTCGCA
GCGCTCACCG GTCTGGCGCT CAACTGTCGC ATTTCCAACG AAAACGTCAT TAGCCGGAAG
AATTATTTCT ATGCCGACCT TCCATCCGGC TATCAGCGCA GCCAGTACGA CGATCCGCTC
TGCGTCGATG GGTGGGTGGA GATCGAGGGG GACCACGGGC CAAAGCGGAT AGGGCTGACG
CGCGTGCATA TCGAAGAAGA CACCGGCAAA CTGGTGCATA CGAACGATGG CGGGTCGCTG
GTCGATTTTA ACCGCGCTGG CGTGCCGCTC ATGGAGATCG TCTCGAAGCC GGATCTTTCT
TCGCCAGAGG AGGCGCGTCG CTATTTTCAG AAACTGCGCC AGATTCTGGT CTGGATTGGC
GTCAACAGCG GCGATATGGA GTCGGGTGCG CTGCGCTGCG ACGCCAACGT CTCGGTGCGC
CCGGTCGGGC AGCAAGAATA TGGCGCCAAA GTCGAGATCA AAAATATCAA CTCGTTTCGC
TTCGTCGAGC GGGCGCTGGC GTATGAGATC GAACGTCAGA TTCGGGCGCT CAAAGCCGGT
GAGCCGATCG TTCAATCAAC GCGCGGTTGG GACGAAACCA GCGGGACGAC GGTTGCGCAG
CGCACGAAGG AGTTTGCCGA GGATTATCGC TACTTCCCGG AACCGGATAT TCCGCCGTTG
CACCTGACTG ATGTCTGGAT CGCCGAACGG CGCGCTGAAC TGCCGGAATT GCCCGATGCC
CGTCGTAGAC GCTTTATCGA GGAGTACGAA TTGACTGCGT ATGACGCTGG TGTGTTGACT
GATGAGCGTG CCGTTTCTGA TTTTTATGAG CAGGCAGTCG CAGCAGCGCG CATACGTGGC
GTAACGCCGA AGGATGTGGC GAACTGGATG ACGGGTGAGT TCTTCCGTTT GCTCAAGGAA
ACCGGCGAGA CGCTTGAGAT CGCTGCGCAA CGCCTTCGCC CCGACTACAT TGGCGAAGTG
CAGGAATTGC TGAACCAGGG CGTGATTACA CGCACCAGCG CCAAAGAAGC GTTCGAGGCT
TCTTTCCGCG AAGGGCGCTC TCCGGCGACG ATCGTCGCCG AGCGCGGTCT GGCAGTCATT
GGAGCGGGTG ACGCGCTGAC GGATCTGGTA CGGCAGGCGA TCACCGGCAA TCCGAAGGTG
GTCGAAGAAT ATCGGCGGGG CAAGGCGACC GCCATCAAAT TCCTGATCGG GCAGGTGATG
AAAGCCTCGC GTGGGCAGGC GAATCCGCAG GCGGTGCAAC AGGCGCTGGA GCAGGAACTG
GCGCGAGAGT AG
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| Protein sequence | MDYLVTIGLE IHAQILTRSK MFCGCSADYA HAPPNTHVCP VCMGLPGALP VPNRRAIELA
ALTGLALNCR ISNENVISRK NYFYADLPSG YQRSQYDDPL CVDGWVEIEG DHGPKRIGLT
RVHIEEDTGK LVHTNDGGSL VDFNRAGVPL MEIVSKPDLS SPEEARRYFQ KLRQILVWIG
VNSGDMESGA LRCDANVSVR PVGQQEYGAK VEIKNINSFR FVERALAYEI ERQIRALKAG
EPIVQSTRGW DETSGTTVAQ RTKEFAEDYR YFPEPDIPPL HLTDVWIAER RAELPELPDA
RRRRFIEEYE LTAYDAGVLT DERAVSDFYE QAVAAARIRG VTPKDVANWM TGEFFRLLKE
TGETLEIAAQ RLRPDYIGEV QELLNQGVIT RTSAKEAFEA SFREGRSPAT IVAERGLAVI
GAGDALTDLV RQAITGNPKV VEEYRRGKAT AIKFLIGQVM KASRGQANPQ AVQQALEQEL
ARE
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