| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3935 |
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| Symbol | |
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| ID | 5541441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5134760 |
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| End bp | 5136712 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896043 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_001433986 |
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| Protein GI | 156743857 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.82655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.289959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCG ATGTAGTCGA ACCAAAAACG ATCAGTCAGT TCGAGGACGA ACAGGGCATC
TATCAGCCCG CGCCGCACAT TGTTGAGCAA GCCAATATCA CGGCGTACAT GCGCTCGAAA
GGCTTCTCAA CTTGGGAAGA ATTGTACCAG TGGTCGATTG AACATCCGCA CCTCTTCTGG
GCGGACATGG CGAACCGCCT GGAGTGGTAT GAACCGTGGG AAAAAGTGCT CGACGACTCG
AATAAGCCCT TCTACAAATG GTTCGTCGGC GGTAAGTTTA ACATCGTCCA CAATGCTATC
GACCGCCATC TGAAAACTGC CCGTCGCAAC AAACAGGCGC TCATCTGGGA AGGCGAGGAT
GGCAGTTATC GCGCCTTCTC CTATTTTGGC ATCAACCGCG AAGTGTCGAA GTTTGCCAAT
GTCCTCAAGA GCATGGGCGT TCAGCCGGGT GACATCGTCT CGATCTACAT GCCACGCATC
CCCGAACTGG TTTTTGCGAT GCTGGCATGT GCCAAGATCG GCGCGGCACA CTCGGTGATC
TACGGCGGCT TCTCGGTGGA GGCGTTGCGC GAGCGGATCG CGGATGCGCA GTCGAAAGTG
CTGATTACCG CCGATGGCGG CTACATGCGC GGGAAGATTG TCGAGCTGAA GAAAATCGCC
GATGAAGCGA TGGGGCATAG CCCCTCGATC CAGACCTGCA TTGTCGTGCG GCGCACCGGG
CATAATGTTG AGATGCAGGC GGGCCGCGAC TATTGGTGGC ACGATCTGAT GAGCCTGCCG
ATTGCGACCG CGCGCTGTGA GACCGTCCCG GTCGATGCTG AGCATCCGCT CTATATTCTG
TACACCTCCG GCAGCACCGG CAAGCCCAAG GGGGTGGTGC ATGTCCACGG CGGCTATGCT
GTCTATATTG CATCGACCCT GTACTTTACC TTCGACATCA AAGAGGAGGA TCGCTATTGG
TGCGCTGCCG ACCCCGGCTG GGTCACCGGG CATTCGTACA TTGTGTATGG TCCGTTGATC
GAGGGCGCCA CATCGTTCAT GTACGAAGGC GCACCCAATT ATCCCTACCC GAATCGCTGG
TGGAGCCTGG TGGAGAAGTA CGGCATCAAC ATTCTCTATA CCGCTCCCAC GGCCATTCGC
GGCCTCATGC GCTTTGGCGA TGCCTGGCCC AACCGCCACG ATCTGTCGAG TCTGCGCCTC
CTCGGATCGG TCGGTGAACC GATCAACCCC GAAGCCTGGC GCTGGTTCTA CAATGTCATT
GGCAAGGGGC GCTGCCCGAT TATGGATACC TGGTGGCAAA CCGAAACCGG CGGTTTCATG
ATTACGCCCA ACCCTACGAC GCCGCTCAAG CCCGGCTCTG CCACCCGTCC GTTTCTCGGT
ATCCAGGCGG ATGTGGTCGA TGAACAAGGG CACAGCAAGG GCGCCAATGA GGACGGTTTG
TTGGTGATCA AGTCGCCGTG GCCCGGCATG ATGCGCACCA TTCTGCGCGA CCCGGATCGG
TATGTCAATC AGTACTGGAA CAGCGACCCG CGTGGCATGT ACACGGCGGG CGACTCGGCG
CGCAAGGACG AGGACGGGTA TTTCTGGATC ATCGGGCGCA TCGACGATGT GATTAAGGTG
TCGGGGTATC GCCTGGGCAC GGCAGAGATC GAGAGCGCAC TGGTGTCGCA CCCGGCGGTT
TCGGAAGCAG CCGCCATCGG TCTACCGCAC GAGGTGAAAG GGACGGCGAT CCACTGCTTC
GTCATTCTGC GGGCTGGCAT CGAGGAGACG CCGGCGCTGG AAGACGAACT CAAGGCGCAC
GTCGCCCGCG AGATGGGACC GATTGCGCGC CCGGAGAGCA TCAAGTTCGT CTCGATGCTC
CCCAAGACGC GCTCAGGCAA GATCATGCGG CGGGTGCTCA AGGCGCAGGC ATTGGGTCAG
GATCCCGGCG ATCTTTCGAC GCTGGAGGGG TAA
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| Protein sequence | MSIDVVEPKT ISQFEDEQGI YQPAPHIVEQ ANITAYMRSK GFSTWEELYQ WSIEHPHLFW
ADMANRLEWY EPWEKVLDDS NKPFYKWFVG GKFNIVHNAI DRHLKTARRN KQALIWEGED
GSYRAFSYFG INREVSKFAN VLKSMGVQPG DIVSIYMPRI PELVFAMLAC AKIGAAHSVI
YGGFSVEALR ERIADAQSKV LITADGGYMR GKIVELKKIA DEAMGHSPSI QTCIVVRRTG
HNVEMQAGRD YWWHDLMSLP IATARCETVP VDAEHPLYIL YTSGSTGKPK GVVHVHGGYA
VYIASTLYFT FDIKEEDRYW CAADPGWVTG HSYIVYGPLI EGATSFMYEG APNYPYPNRW
WSLVEKYGIN ILYTAPTAIR GLMRFGDAWP NRHDLSSLRL LGSVGEPINP EAWRWFYNVI
GKGRCPIMDT WWQTETGGFM ITPNPTTPLK PGSATRPFLG IQADVVDEQG HSKGANEDGL
LVIKSPWPGM MRTILRDPDR YVNQYWNSDP RGMYTAGDSA RKDEDGYFWI IGRIDDVIKV
SGYRLGTAEI ESALVSHPAV SEAAAIGLPH EVKGTAIHCF VILRAGIEET PALEDELKAH
VAREMGPIAR PESIKFVSML PKTRSGKIMR RVLKAQALGQ DPGDLSTLEG
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