Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3913 |
Symbol | |
ID | 5541419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5114141 |
End bp | 5115010 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640896023 |
Product | hypothetical protein |
Protein accession | YP_001433966 |
Protein GI | 156743837 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.526022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.116222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACGCA TAGTTTTCCT CGTTCCTCTC CTGATCATCA CAATGCTGAC GGCGGCAATG CCCGCTTCCG CTTCGGCGCT CCCCTTCGGC AATGATGCGT TCCGCCGTGT CTGGGAGCGC CAGGATCGCC CCGTTGCCGA GCAGATCAGC GGACGGTCGT GGACGTGGGG ACCCGCGCCC AATACCCCGG CGATGCGGGA ACCGCTGGTT GAAGGCTACG AAGGAATGCG CGTGGTGCAA TACTTCGACA AGAGCCGCAT GGAGATCAAC GACCCAACCG TTAACCCCTT CTCGCCCTGG TACGTCACCA ATGGGTTGCT ACCCATTGAG ATGATGACTG GACGGATGCA GGTAGGGTAC AATCTCTTCG AGTGGCGCCT GCCAGCCCGC ATCACAGCGA TTGGCGACCC GGATCAGTTC CCAACCTACG CCGATCTGCT CCGCTTCTAC CAGAACCCTG GCGCTGTCAA CCCGAACGAT CTGAATCGCC CGGCGACCGG GTTCATCAAC CCGGATGGCA GCATCACCGG TTTCAACGAC TACGCCAATG ACCCGGCGAC AATGCTGGTG CTCGGACCCA ACAATCACGG CGTCGCCCGC GCATTCCTGG ACTTCATGAA CCAGAGCGGT CTGGTGTACG AGAACGGGCG CTATGTCGTT GCGCAGGTCT ACGATCCGCT CTATGTCTTT GGACTGCCGG TGACGGGCGC GTACTGGGTC AAAGTGAAAG TTGGCGGCGT CGAGCGCCCG ATTCTGTTCC AGGTATTCGA GCGGCGCGTG CTGACCTACA ACCCGGCAAA CCTGCCTGCC TTCCGCGTCG AGATGGGGAA TGTCGGACAA CACTACTACT GGTGGCGGTA TGGGCGTTGA
|
Protein sequence | MRRIVFLVPL LIITMLTAAM PASASALPFG NDAFRRVWER QDRPVAEQIS GRSWTWGPAP NTPAMREPLV EGYEGMRVVQ YFDKSRMEIN DPTVNPFSPW YVTNGLLPIE MMTGRMQVGY NLFEWRLPAR ITAIGDPDQF PTYADLLRFY QNPGAVNPND LNRPATGFIN PDGSITGFND YANDPATMLV LGPNNHGVAR AFLDFMNQSG LVYENGRYVV AQVYDPLYVF GLPVTGAYWV KVKVGGVERP ILFQVFERRV LTYNPANLPA FRVEMGNVGQ HYYWWRYGR
|
| |