| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3899 |
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| Symbol | |
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| ID | 5541405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5103027 |
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| End bp | 5104226 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896010 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433953 |
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| Protein GI | 156743824 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00043819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.779537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCG GTGATATGCT CGAACGTATG CGCGACCCGC TGGGTGCGCC GTTTTATCCG
CCGGCATTGC AGGTCTTGCT GGTCGTCACG TGGGTGTTCC ATATCTTCTT CGTCACCCTG
GCGCTTGGAT CGAGCGCATT TTCGATCCTG GGATTCCTGC GACCGAATGA GTATCGCCTG
CGCCTGGCGC GCGTCGCGGC GCGGTTGACG CCCAACGCCG TCGGTCTCGG CATTGTGACG
GGAATTGCGC CGCTGCTCTT CGTGCAAACG ATCTACGATC CTATCTGGTA TGCGAGCAAT
ACGCTGAGCG GCTTCTGGTC GGTGAGTTTC ATTTTTGTGG TGATGGGCGG GTACAGCCTG
GCGTACCTCT TCTATCTCAA AGGGAGCGCT GACGGAAGGC TGCTCTGGTC GGCGGTCGCA
TCGTTCATCT TGCTCTTCTT TGCCGGATGG GTGATGCACG TGCTGGCATC GGTGTCGATT
CGCCCAGAGC GCTGGATGGA GTGGTATGCC CCAGGTGGGG TGATCGACAC GCGCGGCGTT
GTGTTCCATT CCTGGAATAT CCCGCGCCTG GCGTTCCTTC TGCCGCTCCA GGCCGGGTTG
AGCCTGGCAG TGGTGCTGAC GTTGTTCGCC TGGTACTTTC GGCGAATCGA AGAGGATGCG
CCGTTTATGA CGTGGGTCGC CGATCGAGGG CGATGGCTGG GTCTGGCGGT CAGCCCGCTG
TATGCGCTCG CCGGGCTGCT CTGGGCAGCG ACAGAAGGCG CCGAGTTTGG GGTTGGCATG
CCGGTTGGCA TCGCGCTCGC TGCCGTCGGT CTGGCATTGA CCGGCTATTT CTTCTTTCTG
AAGCAGCCAA TGCAGCACGC ACCGCGCACA CTGCTGGTCT GGATCATCGC CCTGGTTGTC
GTCGGCATTG TGCGTGAAGG TATTCGCGCC GTCTCACTCG CGCGCTTCGG GTATAGCGTC
TCCAACTATC CATACATGAT GGATTGGGGA TCGATCCTGG TGTTTGGAGT AACAACCGTG
GTTGGCGTTG CCGTAGTGAC GTACCTGGCG CTGGTGCTGT ATCAGTCGGG CGGAACGAAG
CGTGATGCCC AGGTTTCGCC GCGGGTTGAA CGTCTTGGCT CGATTGCAAC CGGTATGCTG
GGCGCGTGGT TTGCCTTCTT CATCCTGGTG GGGCTGTATA CTACGTTCTT CCTCAAGTAA
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| Protein sequence | MDIGDMLERM RDPLGAPFYP PALQVLLVVT WVFHIFFVTL ALGSSAFSIL GFLRPNEYRL
RLARVAARLT PNAVGLGIVT GIAPLLFVQT IYDPIWYASN TLSGFWSVSF IFVVMGGYSL
AYLFYLKGSA DGRLLWSAVA SFILLFFAGW VMHVLASVSI RPERWMEWYA PGGVIDTRGV
VFHSWNIPRL AFLLPLQAGL SLAVVLTLFA WYFRRIEEDA PFMTWVADRG RWLGLAVSPL
YALAGLLWAA TEGAEFGVGM PVGIALAAVG LALTGYFFFL KQPMQHAPRT LLVWIIALVV
VGIVREGIRA VSLARFGYSV SNYPYMMDWG SILVFGVTTV VGVAVVTYLA LVLYQSGGTK
RDAQVSPRVE RLGSIATGML GAWFAFFILV GLYTTFFLK
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