Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3895 |
Symbol | |
ID | 5541401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5099258 |
End bp | 5099734 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640896006 |
Product | ferric uptake regulator family protein |
Protein accession | YP_001433949 |
Protein GI | 156743820 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.845515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTT TTCTCGATGA GCGAAGGCAT ATGCTACCGC CGGCAGTGAC GTCCCTCGCC GAGCAACTGG CGGCCGCAGG ATACAAAGTG ACCCAGCCGC GCCTGGCGGT GCTCAAGGCG ATCACGGCGC AGCCAGGCGC ATTCAGCGTG CAGGAAGTCG AGCAGTGGCT CCTTGAGCGC AATGAGTCGC CGGGGATCGC CAGCATTTTC CGCACCGTCC GTCTCTTGTG CGACCTGGGC ATGCTTCAGC GCCTCCACGG GCTTGACGAT TGCCATCGCT ACTGTCTGGG GAGCGGGCAC ACCCATCATC TGGTGTGCAC CTTGTGTGGC GTGATCGAGC AGTTCGACAA CTGTGGCATT CAGGGAGTCA TTGCTGCGCT TGAACAATCG ACCGGCTATC GCATCACCAA CCATGTGGTG GAGTTGTTCG GCGTGTGTCC GCAATGCCTG GCGCCCTCAG CATCGTCGGC GACGTAA
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Protein sequence | MSRFLDERRH MLPPAVTSLA EQLAAAGYKV TQPRLAVLKA ITAQPGAFSV QEVEQWLLER NESPGIASIF RTVRLLCDLG MLQRLHGLDD CHRYCLGSGH THHLVCTLCG VIEQFDNCGI QGVIAALEQS TGYRITNHVV ELFGVCPQCL APSASSAT
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