| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3884 |
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| Symbol | |
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| ID | 5541390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5081313 |
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| End bp | 5082392 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895995 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001433938 |
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| Protein GI | 156743809 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.242445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCG TCTGGCATTC ATCATTCGCA TCACTCACCG GCTACAGCGG CTCATCGCTT
GCTTTCGTCC TGGGGCTTGA TGCGCGCGGC GTGGCGGTTC GTCCGCTCTA CCTGTACGGC
GCCGACCGCG ATGAGCATGT GATGATGGGG CGCATCCATC CGCGCATTGC CGAGTTACAG
CGCGCTCCGG TGCGTTTTGA TGCGCCGCAG GTCGTGTATG CGCCGGGTGA CCGATTCTCG
AAGAACAGCG GGCGCTACCG CATCGGCTTC ACCATGCTCG AATTTGATCG TCTGCCGCAG
GAATGGGTGC AGCAGGCCAA TCAGATGGAC GAAGTCTGGA CGCCGACTGC CTGGGGCGCC
GACGTGTTTG CGGCAAGCGG CGTCACCCGC CCGATCTTCG TTGTGCCGCT TGGCGTGGAT
TCAGGACGCT TTGAACCGGG AGAACCGCGC GCGCATTTGA CCGACCGCAC GGTATTCCTC
TCGGTCTTTG AGTGGGGACC GCGCAAAGGA TGGGATATTC TGCTGCGCGC CTACCGCGCA
GCCTTTCGTG CCGGTGATCC GGTTGTGCTG GTGTTGAAGA TCGACTGCCG CGCCCCTGGC
GAGAATCCTG TGCGTGAACT GGCGACGCTG TTGCCCATGC CATCACCGCC GGTTGTGCTT
CTCTACAACC GTTCCCTGGA CGCGCAGCGT ATGGCGGAAC TCTACCGCAG CGCCGACTGC
TTCGTGTTGC CGACGCGCGG GGAGGGGTGG GGCATGCCGA TCCTCGAAGC GATGGCGTGC
GGCATCCCTG CAATTGCAAC CGACTGGAGC GGACCGACGG CGTTTCTCAG CCGCGAGAAT
GGCTATCCAC TGCCGATTCG CGGTCTCGTT CCCGCCGATG CTGGCGGCGC CTACGGTATT
GGCGCGCAAT GGGCAGAGCC GGACGCCGAT GCCCTGGTTG ATCTGCTGCG TCAGGCGGTG
CAACACCCCG ATGAGCGCCG CCGCAAAGGG CTGCGCGCTG CCGCCGACGC CAACCGCTGG
ACGTGGGATC GCGCAGTGGA ACGGGTCTGT GCGCGTTTGA AGGAAACCGG AATCTGGTGA
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| Protein sequence | MELVWHSSFA SLTGYSGSSL AFVLGLDARG VAVRPLYLYG ADRDEHVMMG RIHPRIAELQ
RAPVRFDAPQ VVYAPGDRFS KNSGRYRIGF TMLEFDRLPQ EWVQQANQMD EVWTPTAWGA
DVFAASGVTR PIFVVPLGVD SGRFEPGEPR AHLTDRTVFL SVFEWGPRKG WDILLRAYRA
AFRAGDPVVL VLKIDCRAPG ENPVRELATL LPMPSPPVVL LYNRSLDAQR MAELYRSADC
FVLPTRGEGW GMPILEAMAC GIPAIATDWS GPTAFLSREN GYPLPIRGLV PADAGGAYGI
GAQWAEPDAD ALVDLLRQAV QHPDERRRKG LRAAADANRW TWDRAVERVC ARLKETGIW
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