| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3857 |
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| Symbol | |
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| ID | 5541361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5040640 |
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| End bp | 5041590 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895967 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001433912 |
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| Protein GI | 156743783 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCGCT TGACACAACG TCAGATCAAT CACGGGGTTT TCGGATTACT CAACGGATTG
GCGTTGATAG CGATTGGTTT TTCCATCTTT CCAACACCGC AATGGCATGC AATCATTCCA
GTCCTCGCAG GGCTGGCGTT CGGCAGTAGT CTGTGGTTCG CCTACTGGCG CGGGTGGGAG
CCGGCGCGTC CTTTGCTTAT TCTCTTGCTC ACCGTTATTG TAGCTCTGGG CACTGCGGAA
ACGTTTATTG CGACGCGGTT CAACCATACG CTCTATACCA TCCCGGCGTT GGCGCTGGTG
TTGACCGGTC CTGTATGGGT TGCAGGCAGT GCGCTGACGC TGCTCGTCGC CTTCGCCATC
CGTGGCGGCG GCGGTCCCTA TCTCAATCCA TTCGAACTGC TGACGTTCGT GTTGGTCATT
GGCGGCATGA TCTTCAGCCG TCTGGCAGTC GATAATGCGC AACGACTCGA AGCGGCAAAG
CGCGAGGCGG AGGAGGCGCG CACGCGCGCT GAGCAGCGCG AACGCGACCT TGCCGCGCAG
GCGGAAGAAC TGGCGCAGCG CAATGTGGAG CAACAGCGCC TCCTCGAACT GGTTTCGGCG
CTGGAAACGC CAACCATTGC GCTGGCAGAG AGCGTGCTAC TGGCGCCGAT CGTCGGCGCG
CTCGACACCC GCCGTGCGCA GGCGCTTACA ACGCGATTGC TCAACGACGC CAGCGCCCAG
CGCGCGCAGC ACGTCATTCT CGACATCAGC GGTGTTACGG CAGTCGATAC ACAGGTAGCG
CAGGCGCTCA TTCAGACTGC GCGGGCGCTG AGTCTGATCG GCTGCCGGGT GACGCTCACC
GGCATCTCGG CAACGGTGGC TATGACCCTG ACCAATCTGG GGGTGGCGCT GGAGAGCATC
CATACCGTGC GTTCACCGCA GGAGGCGCTT GCCGCGCGAA CTGAGAACTG A
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| Protein sequence | MIRLTQRQIN HGVFGLLNGL ALIAIGFSIF PTPQWHAIIP VLAGLAFGSS LWFAYWRGWE
PARPLLILLL TVIVALGTAE TFIATRFNHT LYTIPALALV LTGPVWVAGS ALTLLVAFAI
RGGGGPYLNP FELLTFVLVI GGMIFSRLAV DNAQRLEAAK REAEEARTRA EQRERDLAAQ
AEELAQRNVE QQRLLELVSA LETPTIALAE SVLLAPIVGA LDTRRAQALT TRLLNDASAQ
RAQHVILDIS GVTAVDTQVA QALIQTARAL SLIGCRVTLT GISATVAMTL TNLGVALESI
HTVRSPQEAL AARTEN
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