| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3845 |
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| Symbol | |
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| ID | 5541349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5026004 |
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| End bp | 5027698 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895955 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001433900 |
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| Protein GI | 156743771 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.267838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0712114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGC GCGATTTATT TGTCCGTCCA TCATCGATTC TGATGGTCCT GCTGATCGCT
GGCTCGTTGA TTCTGGCTGC ATGCGGCGCA ACGCCGCAGC AGAGCGCTCC TGTTCCCACT
CAGGCGGGCG CCGCACCGCC GCCGACATCG GTTCCTGCCA CCCCTGCCGA CGCCAGACCA
CAGGCGACCG GTCGGACGCG CCTGGTTTTC TTCGGCAATC TGGAACCAGC CAGTATCGAT
GTCATCACAA TGTCGGGCAA CGTCAATGAA CGTCAGGTCG CCGCACAGAT TTTCGAAACG
CTGGTGTACA TGGATCAGAG CCAGCAGATA TACCCCGGTC TGGCGCGCGA ATGGAGCCGT
TCCGATGATG CGACGACGTG GACGTTCAAG TTGGTTTCGG GAGTAAAATG GCACGACGGC
ACGCCGTTCA CGGCTCAATC GGTGGCGGAC TATTTCGACT ACATTCGCGA TAATCCCGTC
GGAAGCGGAC CTGGATCGCT CAAAGCCGTA ATCGGCAGCG CCAAAGCAGT CGATGAAACG
ACGGTCGAAC TCACGCTCAC TGCGCCGCGT CCCGATTTGC TGATTGAGCT TGCGGATCCG
GGGATGGGCA TTGGAAATGC CGCCTACCTG AAACGGGTGG GCGCCGATGC CGGTTTCAAT
CCGGTGGGAA CCGGTCCATT CAAGTTCAAG GAATGGGTGC GCGGCAGCCA GATCGTGCTG
GAGCGCAACC CTGAATGGAC CTGGGGGTCA CCCTTGTTCA AGATGAGCGG TCCTCCTTTG
ATCGAAGAAG TGGTCTTTCG CTTTTCTTCT GAAGCGCAAA CACGACTTGC AGCGCTGGAA
GCCGGCGAAG TCGATTTCGT TGACCTTCTG CCATTCCAGG ATGTCGTGCG TGTCCGCACC
GATCCGCGCT TTACCGTCAC CGGCGTGCTG CTACCGGGCA TGCCGCAAAT GAACTATCTC
AACACCAGCC TGGCGCCGAC CGATGACATA AATGTGCGCA AAGCGATTAT CTATGCCACG
GACAAGCAAG GTATCATCGA GAGCGTTTAT TTCAACATGG TCGAACCGGC ATACGGACCG
CTGTCGCGCG TCTTCCCAGA GTACGAACCG GCGCTGGAGC AGATGTACGA GTACAATCCT
GAGAAAGCCG CGCAATTGCT CGAAGAAGCC GGCTGGCTTC CCGGTCCCGA CGGCGTTCGT
GTCAAGGACG GTCGGCGCCT TGAAGTGACG ATCGTTGAGA ATAAAGGCTG GAACGATTGG
GTCTATGTGC TGCAAGCCAA TCTCCAGGCT ATCGGCTTTG ACGCAAAAGT GCTCACCACC
CAGGGCCCGT CGAATACGGA AGCGATTGCC AGCGGCAAAT ACCACGTTCC GGCTATGGGA
GACGTTTTCG CTTCTGCCAG CCAGATGACC CGTGACTGGC ACTCAGAGGG GTACGGAACC
TTTCCTTCCG GTCATTTTCT GAAAGGCGAA GACGGCGCCA GATTGGACAG GATGCTGAAA
GAGGCGGAGA CGGAGATCGA CCCGGAAAAA CGCATCGAAA AGTATCGTGA GATTCAGAAG
TTCATCATGG AGCAAGCGTT GATGGTGCCG ATCTTCGAAC TGTACTTCTA TGTCGCCCAC
GCGAACAATC TGAAAGGCTT CGTCGTCGAT GGCACGGGTT TCTACAAGTA CTTTGCGCCA
GCGTACTTTG AGTAA
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| Protein sequence | MALRDLFVRP SSILMVLLIA GSLILAACGA TPQQSAPVPT QAGAAPPPTS VPATPADARP
QATGRTRLVF FGNLEPASID VITMSGNVNE RQVAAQIFET LVYMDQSQQI YPGLAREWSR
SDDATTWTFK LVSGVKWHDG TPFTAQSVAD YFDYIRDNPV GSGPGSLKAV IGSAKAVDET
TVELTLTAPR PDLLIELADP GMGIGNAAYL KRVGADAGFN PVGTGPFKFK EWVRGSQIVL
ERNPEWTWGS PLFKMSGPPL IEEVVFRFSS EAQTRLAALE AGEVDFVDLL PFQDVVRVRT
DPRFTVTGVL LPGMPQMNYL NTSLAPTDDI NVRKAIIYAT DKQGIIESVY FNMVEPAYGP
LSRVFPEYEP ALEQMYEYNP EKAAQLLEEA GWLPGPDGVR VKDGRRLEVT IVENKGWNDW
VYVLQANLQA IGFDAKVLTT QGPSNTEAIA SGKYHVPAMG DVFASASQMT RDWHSEGYGT
FPSGHFLKGE DGARLDRMLK EAETEIDPEK RIEKYREIQK FIMEQALMVP IFELYFYVAH
ANNLKGFVVD GTGFYKYFAP AYFE
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