| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3832 |
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| Symbol | |
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| ID | 5541335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5006921 |
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| End bp | 5008591 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895942 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001433888 |
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| Protein GI | 156743759 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.988411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATAC GCATCAAGAA AAGCCGACGC CTCATCCGTA TGCGCTCCGG CGCCTGTGAG
AAGACGATCA TGAGCGATCC GATCATTCTC TACAATGGTC CCATTTACAC CCTCGACCCG
GCTCACCCCC GCGCGCAAGC GGTTGCTATA CGCAATGGGC GCGTCATTGC CGTCGGCAGT
GAGGGCAAGG TGCGCGCTGC CGTCACCGGT CGCGCTGAGG GAATCAATCT CAACGGTCGC
GCTCTCATTC CGGCGCTCAC CGATGCGCAT GTTCACTTGA TTGCGCATGC GCTGGCGCGG
CGCAACGTCC GGCTCGACGA TGCGGCAACC CTTGACGATG CGCTCCAACA GATCGGCGTA
GCGGCGGAAC GTCTCCCCGC TGGCGCGTGG GTGCAGGGGC GCGGCTGGGA TCATTCGCGG
TGGGGGCGCT GGCCCACTGC TGCCGACCTC GATGCCGTCA TCGGTGATCG ACCGGCGTAC
TTCTCGCGGA AGGACGGGCA TTCCGCCTGG GTCAGCAGCG CCGCGCTGCG CCTGGCAGGG
ATCACTGCCG AGACGCCCGA TCCTGTCGGT GGCGCGATCC AGCGTGAGCG CGGCGAACCG
ACCGGCATTC TGCTGGAAAC CGCAATCGAC CTGGTGCGAC GCCATATTCC TGAACCCGGG
CAGGAGGAGC GCCTGGCTGC GGTTCGTGAG GCAATCGAAG AGGCGCACTC GTATGGGATG
GTTGGGATGC ATCTGCCCAC GAGCATGACC CCTGGCGATG GTCGGATGAC GCTTGATGAC
CTGCAAACGC TCCGTGAGCG CGGTCACCTT CAGTTGCGCT GCCTGGTCTA TCTTGGTCTC
GACGGTCTCG ATGCAGCGCT GGCGCTGGGG TTGCACAGCG GGCTTGGCGA TCGCTGGATC
CGTCTTGGGG GCATCAAGAT GTTTGCTGAT GGGTCGCTCG GCTCGCAAAC CGCAGATATG
CTTGCCCCTT ATGAGGGGAG CAGCAATCGC GGGATTGCAG TGCTGTCATC TGGGGAGTTG
CGCCATGCTG TGCGCCGCGC GATCCACGGC GGTTTAGCGG TGATGGTGCA TGCCATCGGC
GATGCTGCCA ATCGCAAGGT GCTCGACGCC ATCGAAGCGG CGCTGCCCGG TGCGCCTCCG
TTGTCCATCC CCAACCGCAT CGAGCACTGC CAGGTGGTGC ATCCGGATGA TCTGCCCCGT
TTTGCGCGCC TCGGCGTTAT TGCCTCGATG CAACCGATCC ATTGCACTGC CGATATGGAG
GTGGCGGATG TGCTTTGGGG GAAGCGCTGC GCGTATGCAT ACGCCTGGCG CTCGTTTCTC
GATGCTGGCG CAACCCTCGC GTTCGGCTCT GATGCGCCGG TCGAATCGCT CAATCCCTGG
CTCAGCGTCC ATGCTGCGGT CACCCGCCAG CGACCGGAGG GCACGCCGGA TGGCGGTTGG
TATTCTGAAC AGCGCCTGAC AGTCGAAGAG GCGTTGCGTG GTTTTTGCTA TGGGTGTGCG
GTGGCGGCGG GCGCTGCCGC TGAACAGGGT GTGATTGCGC CTGGCATGCT CGCCGACTTT
GCGATACTGT CCGCCGACCC CTTCAAACTC GATCCATCGG CGTTGCACAC GATTCGTGCC
GAGATGACCA TCCTCGAAGG CAAGGTTGTC TGGGAACAGG AACGCCTGTA A
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| Protein sequence | MRIRIKKSRR LIRMRSGACE KTIMSDPIIL YNGPIYTLDP AHPRAQAVAI RNGRVIAVGS
EGKVRAAVTG RAEGINLNGR ALIPALTDAH VHLIAHALAR RNVRLDDAAT LDDALQQIGV
AAERLPAGAW VQGRGWDHSR WGRWPTAADL DAVIGDRPAY FSRKDGHSAW VSSAALRLAG
ITAETPDPVG GAIQRERGEP TGILLETAID LVRRHIPEPG QEERLAAVRE AIEEAHSYGM
VGMHLPTSMT PGDGRMTLDD LQTLRERGHL QLRCLVYLGL DGLDAALALG LHSGLGDRWI
RLGGIKMFAD GSLGSQTADM LAPYEGSSNR GIAVLSSGEL RHAVRRAIHG GLAVMVHAIG
DAANRKVLDA IEAALPGAPP LSIPNRIEHC QVVHPDDLPR FARLGVIASM QPIHCTADME
VADVLWGKRC AYAYAWRSFL DAGATLAFGS DAPVESLNPW LSVHAAVTRQ RPEGTPDGGW
YSEQRLTVEE ALRGFCYGCA VAAGAAAEQG VIAPGMLADF AILSADPFKL DPSALHTIRA
EMTILEGKVV WEQERL
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