Gene Rcas_3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3818 
Symbol 
ID5541321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4988873 
End bp4989877 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content59% 
IMG OID640895928 
ProductATPase 
Protein accessionYP_001433874 
Protein GI156743745 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAA CCGAAGAAAT GACGCAGGAC GCTCTCTCGC CTGAAGAGTT TCGCCAGCGC 
GCGCTGGCGA TTGAGACCGA GATTTCACAG GTGATCGTCG GACAACGAGA ACTGATCCGG
CAGACGGTCA TTACATTGCT GGCAGGCGGT AATGCGCTCC TCGAAGGGGT GCCTGGCCTG
GCGAAAACCA CGCTGGTGCG CACGCTCGCC GATGTGATCG ACTGTTCCTT CAGCCGCATC
CAGTTCACGC CCGACCTTAT GCCGGCCGAC ATCGTCGGTA CGACTCTCAT CAGCGAGGAT
GAAGCAGGGC GCAAAACGTT TCGGTTCGAG CCGGGTCCGA TTTTTGCGAA CCTCATCCTG
GCGGACGAAA TCAACCGCGC AACGCCGAAA ACGCAGAGCG CTTTGCTCGA AGCAATGCAG
GAACACACGG TAACGGTCGC CAAAACCATC CACCGCCTGG AAAGCCCATT CTTCGTTCTG
GCGACACAGA ACCCGCTCGA AATGGAGGGT ACCTATCCAT TGCCGGAAGC GCAACTCGAC
CGCTTTTTCT TCAAGATACT CATTCCCTTT CCCACCGCTG CCGATCTGGT GGAAATCGCC
AATCGCACAA CTGGCGCGCG TGCGCCACAG GTGCGCAAGG TGGCGAATGC CGCGACGATC
CTGGCGATGC AACGACTGGC GCGTTCCGTT CCGATTGCCA GCCACGTTCT CGCCTATGCG
GCACGCTTGA TCACCGCCAC TCATCCCGAA GATAAGGATG CGCCGTCGGT GACAAAACAG
TATGTGCGGT ATGGCGCCAG TCCGCGCGGC ATGCAGGCGC TCATTCTGGC AGCCAAGATC
ATGGCGCTCC TCGATGGACG CTACAATGTC GCCTTCGCTG ATTTGCGCCA GGCGGCGCTG
CCGGCGCTCC GTCACCGTGT CATTCTGAAC TTCGAGGCGC AGGCGGAAGG GGTTGCCCCC
GACGATATTG TTAAACAGGT GGTCGAATCG GTGCGCGCAG AATAA
 
Protein sequence
MTATEEMTQD ALSPEEFRQR ALAIETEISQ VIVGQRELIR QTVITLLAGG NALLEGVPGL 
AKTTLVRTLA DVIDCSFSRI QFTPDLMPAD IVGTTLISED EAGRKTFRFE PGPIFANLIL
ADEINRATPK TQSALLEAMQ EHTVTVAKTI HRLESPFFVL ATQNPLEMEG TYPLPEAQLD
RFFFKILIPF PTAADLVEIA NRTTGARAPQ VRKVANAATI LAMQRLARSV PIASHVLAYA
ARLITATHPE DKDAPSVTKQ YVRYGASPRG MQALILAAKI MALLDGRYNV AFADLRQAAL
PALRHRVILN FEAQAEGVAP DDIVKQVVES VRAE