Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3782 |
Symbol | |
ID | 5541284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4954067 |
End bp | 4955191 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640895892 |
Product | calcium/cation antiporter |
Protein accession | YP_001433839 |
Protein GI | 156743710 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0387] Ca2+/H+ antiporter |
TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) [TIGR00846] calcium/proton exchanger |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.953735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.133642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGTCT TGCGCTACAT GCTCATCTTC GTCCCGCTGG CGTTCCTGGC TGAATTGTTC TTCCCCAATC CCCTGCTCGT CTTTGCGCTT TCCTGCGTGG CGCTCATTCC CCTTGCCGGT CTGCTCGGCG AAGCGACCGA AGAACTTGCC ATTCACGTCG GACCGAAAAT CGGCGGTTTG CTCAATGCCA CTCTGGGAAA CGCCGCCGAA TTGATTATTA CCATCGTTGC GTTGCGCGAG GGCAAGATCG AACTGGTCAA AGCGTCGATT ACCGGCTCGA TTCTGGGCAA CCTGCTCCTT ATCCTCGGTC TCAGCCTGCT GCTTGGCGGC ATTCGTCACG GCATTCAGAC GTTCGACCGC AACCTGACCG GCGTCGCGGC GACGATGATG ATGCTTTCGG TTGTTGGTAT GATGATCCCG ACATTGTTTG AGTTACTTCG TGAGGTGCAG AGCGGTGCTG TCGATGTCTT CAACACTGAT GTGCGCGATC CGGCGCTCGA TGCGCTGAGC CTGGGAGTTG CAGCGATCCT GATTGTGCTC TATGTTCTGA GTCTGATCTT CTCATTTCAG AAACCGGAAC GCGGCATTGG CGCCCCAACC GGTGTTGATG ATCCTTCTGC CGAAATAGAA CACCATCGGG CAAAGTGGAG CGTGCCCGTT TCGCTTGGTG TGCTGACGGT CTCGACGATT GCTATCGTCT TTTTGAGCGA ATTTCTGGTC GGCGCGGTCG AACCGGTGGT GGAGCAACTT GGCGTCAGTG AATTGTTTCT GGGGGTGATT CTGATCCCTC TGGTTGGCAA CGTCGCAGAG CATATTGTCG GCGTGCAGGT GGCAATGAAA AACAAGATGG ACCTATCGTT GTCTATTTCG CTGGGGTCCA GCATGCAGAT TGCGTTGTTT GTCGCGCCGT TGCTGGTCTT TATCAGCCTG CTCTTCGGCA ATGAAATGAC CCTCTATTTC AGTCTCTTCG AGGTTGCTGC GCTGACGCTG GCAGTGCTCT GCGCTGTGCA GGTATCGGTC GATGGCGAGA GCAACTGGCT CGAAGGCGCG CAGTTGCTAG CAGTCTATCT GATTGTTGGT CTTGGGTTCT TTTATGTGGT GACGCCAGGC GTCCATGGCG GCTGA
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Protein sequence | MNVLRYMLIF VPLAFLAELF FPNPLLVFAL SCVALIPLAG LLGEATEELA IHVGPKIGGL LNATLGNAAE LIITIVALRE GKIELVKASI TGSILGNLLL ILGLSLLLGG IRHGIQTFDR NLTGVAATMM MLSVVGMMIP TLFELLREVQ SGAVDVFNTD VRDPALDALS LGVAAILIVL YVLSLIFSFQ KPERGIGAPT GVDDPSAEIE HHRAKWSVPV SLGVLTVSTI AIVFLSEFLV GAVEPVVEQL GVSELFLGVI LIPLVGNVAE HIVGVQVAMK NKMDLSLSIS LGSSMQIALF VAPLLVFISL LFGNEMTLYF SLFEVAALTL AVLCAVQVSV DGESNWLEGA QLLAVYLIVG LGFFYVVTPG VHGG
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