Gene Rcas_3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3773 
Symbol 
ID5541275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4945535 
End bp4946830 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content60% 
IMG OID640895883 
Productacetyl-CoA hydrolase/transferase 
Protein accessionYP_001433830 
Protein GI156743701 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.232234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.702768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCT CGCTAACGGC AGGAAGGCGT GAAATGACCG CTGAAGAAGC GGTGGAACTG 
ATAGAGTCGA ACCATCGGGT ATATATCGGC GGCGGATGCG GCGTGCCCAT ACCGCTGCTG
GATGCGCTCG TAGCACGCGC GCCTGAGTTG CGCAATGTCG AGATCATTCA CATGCTGACG
GCAGGGGAGG ACCCAACGAC GGCGCCGGAA CTGGCGGCGT CATTTCGCCA TAACGCCCTG
TTTATCGGGC ACAACACACG GCGCGCCGTC AACGAGGGGC GCGCCGATTT TACGCCGATC
TTTCTCGGCG AGATTCCAAA ACTGTTTCGG CAGGGCATCC TGCCGCTCGA TGTCGCCATG
ATTCAGGTTT CACCGCCGGA TCGCCATGGG TTCTGCTCGC TTGGGGTAGA AGTCGGATGC
ACCCTGCCGG CAGCGCGCAC AGCAAAGATC GTCATTGCCG AGGTCAATGC ACGGATGCCG
CGCACCCTTG GCGACAGTTT CATTCATATC TCGCGCCTGA CGGCGCTGGT CGAAAGTGAT
CGTCCGCTGC TGGAGTTGCC ACAGGGAGAA ACCAACAGCG TTGCGCAGGC GATTGGTCGC
CACATTGCAG AACTGATCCC GGATGGCGCC ACGCTGCAAC TCGGGATTGG CGCCATCCCG
GATGCGGTGC TCTCGAATCT GCACGGCAAA CGGCACCTGG GGATCCACAC CGAGTTGTTC
TCGGATGGCG TCATTGATCT GGTCGAAGCC GGGGTCATTG ACGGTGAATT GAAGACCATC
CATCAGGGAA AGGTCGTTGC CGGCTTTATC CTCGGCAGTC AGCGTTGCTT CGATTGGGCG
CACAACAATG CTATGGTGGA AATGCACCCT ACCGACTATG TCAACGATCC GTTCGTCATC
GCACAGCACA AGAATATGGT CGCCGTCAAT TCGGCGTTGC AGGTCGACCT GACCGGTCAG
GTGTGCGCCG ATAGCATCGG CACGCGCCTG TACAGCGGGG TTGGGGGGCA GGTCGATTTT
ATTCGCGGCG CGTCGCGCTC AGAGGGGGGT ATTCCCATCA TCGCCATTTC ATCGACGGCA
CGTGACGGCA CAATTTCACG CATCGTGCCG ACGCTCGATG TCGGCGCAGG CGTGGTCACC
AGTCGCTACG ACGTGCATTT TGTGGTCACT GAGTATGGCG TGGCGGACCT GTATGGCCGC
ACCCTGGCGC AACGCGCCCG CGCGCTGATC AATATTGCTC ACCCGGCATT TCGCGATCAG
TTGACCGAAG CGGCGAAAAA ATTGCACTAT ATCTGA
 
Protein sequence
MPRSLTAGRR EMTAEEAVEL IESNHRVYIG GGCGVPIPLL DALVARAPEL RNVEIIHMLT 
AGEDPTTAPE LAASFRHNAL FIGHNTRRAV NEGRADFTPI FLGEIPKLFR QGILPLDVAM
IQVSPPDRHG FCSLGVEVGC TLPAARTAKI VIAEVNARMP RTLGDSFIHI SRLTALVESD
RPLLELPQGE TNSVAQAIGR HIAELIPDGA TLQLGIGAIP DAVLSNLHGK RHLGIHTELF
SDGVIDLVEA GVIDGELKTI HQGKVVAGFI LGSQRCFDWA HNNAMVEMHP TDYVNDPFVI
AQHKNMVAVN SALQVDLTGQ VCADSIGTRL YSGVGGQVDF IRGASRSEGG IPIIAISSTA
RDGTISRIVP TLDVGAGVVT SRYDVHFVVT EYGVADLYGR TLAQRARALI NIAHPAFRDQ
LTEAAKKLHY I