| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3769 |
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| Symbol | |
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| ID | 5541271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4941135 |
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| End bp | 4942457 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895879 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433826 |
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| Protein GI | 156743697 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.96163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0729973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATG AACGAGTCGT GCTCATCACC GGTGGCGGTT CAGGAATCGG GCGCGCAACA
GCGCTGGCGT TCGGCAGGCA CGGCGCGCGC GTAGTCGTCG GCAATCGGGA TCGTGACGCC
GGTGAAGCGA CGGTCGCCGC AATCCGGGCA ATGGGTGGAA CGGCGTTGTT CGTTCCGACC
GATGTCACCC GACCAACAGC GGTGCGCGCG CTGATCGACG CAGCGGTTGA AACGTTTGGA
CGCCTCGATG TTGCATTCAA CAATGCTGGA TGGTTCGGAT CGGTCGCGCC GCTGGCAGAA
CAGGACGAGC ATGAGTTCGA CCCTGTTTTT GACACAAATG TACGCGGCGT TTTTCTGTGC
ATGAAGTACG AACTGGCACA GATGCTGAAA CAGGGGCAGG GTGTCATCAT TAACAATGCA
TCGACGACCG GCATACGCAA TTCGACAATG GGTGTGGCGC TGTATGCCGC AGCAAAAGCG
GCGGTGATTT CCCTGACACG CTCTGCCGCC ATAGAATACG CCGCTCATGG CGTGCGCATT
AATTGCAGTA GCGCCAGGAC GGATTGCGAC CGACATGCTG GCGAAAGCAG GCGGCGGCAA
CCCGGAACGT TTTGCTGCGG TGATTCCCAT GCGACGCCTT GGTACATCAG AAGAAGTCGC
TCAGGCAGTT CTCTGGCTGG CATCATCGGC GGCGTCATTC GTCACCGGTC AGGTGCTGGG
GGTCGATGGC GGATACCTGG CATCATAATA CACATAGAAG GAGACACAAC GATGCATGTC
TGCGTCTACT GCGCCTCGAG CGATCACGTA CCGGCACTCT ATCTGGAAGC GGCCCATACC
TTCGGTGAAG GGATGGCGCG GCGCGGCTGG ACGCTGGTGT ACGGCGGGGG TGGCATCGGA
TTGATGGGCG CGGTCGCGCG AGCGGTACAC GGCGCCGGCG GACGGGTCAT TGGCGTTATT
CCACAAACGC TGCTGGAACG CGAAGTCGGC TATCAGGAAG CGGACGAACT GATCGTCACC
GGAACTCTAC GCGAACGCAA GCAGATCATG GATGATCGCG CCGATGCGTT CGTCGCGCTG
CCAGGCGGCT TCGGCACACT CGAAGAATTG CTGGAAATCA TGACGCTTCG CATGCTTGGC
TACCACAACA AGCCGATCGT CATCGTCAAC ATTGGCGGTT ATTTCGATCC GCTCCTGACA
CAGTTCGAGT ATATCTTCAC CCAAAACTTT GCCCACGAAC GCTACCGCCG TCTCTACGCC
GTGAAAGCCG ATCCTGAAAC AGCCCTCACC TATCTGGAGC GAATCACGCC TGGCTCGCCG
TAA
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| Protein sequence | MFDERVVLIT GGGSGIGRAT ALAFGRHGAR VVVGNRDRDA GEATVAAIRA MGGTALFVPT
DVTRPTAVRA LIDAAVETFG RLDVAFNNAG WFGSVAPLAE QDEHEFDPVF DTNVRGVFLC
MKYELAQMLK QGQGVIINNA STTGIRNSTM GVALYAAAKA AVISLTRSAA IEYAAHGVRI
NCSSARTDCD RHAGESRRRQ PGTFCCGDSH ATPWYIRRSR SGSSLAGIIG GVIRHRSGAG
GRWRIPGIII HIEGDTTMHV CVYCASSDHV PALYLEAAHT FGEGMARRGW TLVYGGGGIG
LMGAVARAVH GAGGRVIGVI PQTLLEREVG YQEADELIVT GTLRERKQIM DDRADAFVAL
PGGFGTLEEL LEIMTLRMLG YHNKPIVIVN IGGYFDPLLT QFEYIFTQNF AHERYRRLYA
VKADPETALT YLERITPGSP
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