| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3767 |
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| Symbol | |
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| ID | 5541269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4939312 |
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| End bp | 4939686 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895877 |
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| Product | LrgA family protein |
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| Protein accession | YP_001433824 |
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| Protein GI | 156743695 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.58563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0600127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTACGAG GAATGACCGT TTTGCTCATC TGTCAGTTGA TCGGCGAAGT GACGGCGCGT
GCGCTCAATC TGCCGATGCC CGGACCGGTG CTTGGCATGT TGCTGCTCTT CAGCGTTCTG
CTATGGCGCG GCGCCCCTGA ATGGCTCGAT CAGGTTGCGC AAGGATTGCT GCGTTTTCTT
CCCCTTTTCT TCGTGCCGGC CGGCGTCGGC ATCATGAACC ATGTGCAACT GATGCGCGCT
GAGTGGCCGG CAATTGCCAT CACTCTGCTT GTCAGCACGG TCATCACGAT GATCGTCACC
GCAGGGGTAT TGCTCCTCTT TCTCCGTCTG ACCGATGCAA GAAAGGCTTC CACGCATGCA
ACCAACCATG ACTGA
|
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| Protein sequence | MLRGMTVLLI CQLIGEVTAR ALNLPMPGPV LGMLLLFSVL LWRGAPEWLD QVAQGLLRFL
PLFFVPAGVG IMNHVQLMRA EWPAIAITLL VSTVITMIVT AGVLLLFLRL TDARKASTHA
TNHD
|
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