| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3740 |
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| Symbol | |
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| ID | 5541242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4906458 |
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| End bp | 4907180 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895851 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001433798 |
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| Protein GI | 156743669 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0083568 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000341691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGAGACGC TCATTGAACG ATTGTCCGCA GTGCGCGAGC GGATTGCTGC CGCTGCGCGC
CGCGCGAACC GCGATCCCGC TGCGATTCGC CTGGTGGGAG TAACGAAGGC GCAGCCGGTA
GAGGCGATCC GTGCGGCACT GGCAGCCGGA TTGCACGAGA TCGGCGAAAA TCGGGTGCAG
GAGGCGGAAG CCAAAATGTC GGCGCTTGCG GCGGACCGCC GCCGCCTGAC CTTGCACCTG
ATCGGGCATT TGCAAACCAA CAAGGCAAAA AAAGCCGCCA CATTGTTCGA CATGGTGCAT
TCGGTCGATA GCCTGCGCCT GGCGCAGATA CTCGACCGCC ACGCAGCCGA AACGACAGAT
CGTCTGCCGG TGCTCTTACA GGTGAATGTT TCTGGTGAGA TGACCAAATC CGGGTTCGAT
CTGTGCCACT GGGAAACGCT GCCCGATGTC TATGATCGTT TTTGCGCCGA TGTCGAGCAG
ATCCTGGCGT TGCCGCACCT TGAGGTGCGC GGGTTAATGA CCATCGCGCC CTGGGGACCC
GACCCGGAAC AGGCGCGTCC GGTCTTCCGC GCCGCGCGAC GCCTGCGCGA CTCCCTGGCG
CTGCGTTTCC CCGCAACCGC CTGGCGCGAC CTGTCGATGG GTATGACCGA TGACTTTGAA
GTCGCCATTG AAGAAGGGGC GACCATCGTG CGGATCGGGC GGGCCATTTT TGGGGAACGG
TAA
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| Protein sequence | METLIERLSA VRERIAAAAR RANRDPAAIR LVGVTKAQPV EAIRAALAAG LHEIGENRVQ
EAEAKMSALA ADRRRLTLHL IGHLQTNKAK KAATLFDMVH SVDSLRLAQI LDRHAAETTD
RLPVLLQVNV SGEMTKSGFD LCHWETLPDV YDRFCADVEQ ILALPHLEVR GLMTIAPWGP
DPEQARPVFR AARRLRDSLA LRFPATAWRD LSMGMTDDFE VAIEEGATIV RIGRAIFGER
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