Gene Rcas_3736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3736 
Symbol 
ID5541238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4902666 
End bp4903868 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content51% 
IMG OID640895847 
Producthypothetical protein 
Protein accessionYP_001433794 
Protein GI156743665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00729537 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000341691 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTATTCTT GCGTTCTCGT GCGTTTGTTT ATTGTCGCTG CCATCGTTAT GAGTTTTGTT 
CCATCGTTTG CCGGCTCAGT ATCTGCGCAA CCAACATCTA CGCGTCGTCC TTGTTCACTC
GATGATCCGA GTGGATGGGT CACATGTTCA CCGTATTATT TGTATCGCCG AACGAAGGAC
GTGTATTTTA CGCGCTATTA CCCAGAGACC GGGCATAACC TCTATCTGCC GTTTCTGAAA
TATTGGGATC GTATGGGAAG TCTGCCTGTC TTTGGCTACC CTATCAGTGA GGCGTTCCTG
GAGCAGATTG AAGGACGCTG GTACATGGTT CAGTACTTCG AACGTCAGCG CTTCGAGTGG
CACTATGATC CTGACAATCC TGAACACAGG AGCAGCATAG GACTAGAAGC TGAATACTGG
CTACCTTTGG CGCAAAGTGT GCGATTAGGT CGTCTGGGGG TAGAGGCGCT AAGTCGTGAG
GGACGCGACT GGCAATCGTT TGCGAAGGGC GATCCCTCTG CTCCCCATTT CTTTGCAGAA
ACAGGTCATG CGATTGCGCC GGAGTTTTGG GGATACTGGT CAAGCCATGG AATAGAAATG
GACGGCAAGG CTGGTTTTTC CTTTGCTGAG AGTCTTGCGC TATTCGGGTA TCCGATCTCT
GAAGCGCAGA TCGAAAAGGG GCGTCTGACG CAATGGTTTG AGCGAGCGCG TTTTGAATAT
TTTCCCGAGT TTGAAGGGAC GCCATATGCC GTGCAGCTGG GTCTTTTAGG AAGTGAAATA
GCATCTGAAC GTAAAGGAGA AGAACCATTT CTTGCAACAA ATGCCCTCGA TACGGCGCAT
GCCGCTGGAC AGCGGATGTT GCTGGCTACC GGTCAGGCGC TTCAGCGTCC ACTTGTGTCA
CGTCCAGAAT TGCAGGCGGA GGTGGATCGC GCTGCCGCTG ACTGGCATCA TGCATTTACT
ACAGGAGGTG ACACACATTC GCCGATGATC CGTGTACGCG CAACATACGC CAGCCGGGGG
AATTATCTCG CACCGTCAAT GTGGGGTATT CATCCACATG ATCCAATTGG TGGAACCACG
GGAAAAGAGC AGTCTGATTT CTCTTACGGT TTTTTCGAGT TCTCAAAGCT GACGATTGGA
GTGTACTATC ACGAACATCT GAATACTCCT TCGGTTACTA TGATGTTCAT ACCTGAGCCC
TGA
 
Protein sequence
MYSCVLVRLF IVAAIVMSFV PSFAGSVSAQ PTSTRRPCSL DDPSGWVTCS PYYLYRRTKD 
VYFTRYYPET GHNLYLPFLK YWDRMGSLPV FGYPISEAFL EQIEGRWYMV QYFERQRFEW
HYDPDNPEHR SSIGLEAEYW LPLAQSVRLG RLGVEALSRE GRDWQSFAKG DPSAPHFFAE
TGHAIAPEFW GYWSSHGIEM DGKAGFSFAE SLALFGYPIS EAQIEKGRLT QWFERARFEY
FPEFEGTPYA VQLGLLGSEI ASERKGEEPF LATNALDTAH AAGQRMLLAT GQALQRPLVS
RPELQAEVDR AAADWHHAFT TGGDTHSPMI RVRATYASRG NYLAPSMWGI HPHDPIGGTT
GKEQSDFSYG FFEFSKLTIG VYYHEHLNTP SVTMMFIPEP