Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3736 |
Symbol | |
ID | 5541238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4902666 |
End bp | 4903868 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640895847 |
Product | hypothetical protein |
Protein accession | YP_001433794 |
Protein GI | 156743665 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00729537 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000341691 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTATTCTT GCGTTCTCGT GCGTTTGTTT ATTGTCGCTG CCATCGTTAT GAGTTTTGTT CCATCGTTTG CCGGCTCAGT ATCTGCGCAA CCAACATCTA CGCGTCGTCC TTGTTCACTC GATGATCCGA GTGGATGGGT CACATGTTCA CCGTATTATT TGTATCGCCG AACGAAGGAC GTGTATTTTA CGCGCTATTA CCCAGAGACC GGGCATAACC TCTATCTGCC GTTTCTGAAA TATTGGGATC GTATGGGAAG TCTGCCTGTC TTTGGCTACC CTATCAGTGA GGCGTTCCTG GAGCAGATTG AAGGACGCTG GTACATGGTT CAGTACTTCG AACGTCAGCG CTTCGAGTGG CACTATGATC CTGACAATCC TGAACACAGG AGCAGCATAG GACTAGAAGC TGAATACTGG CTACCTTTGG CGCAAAGTGT GCGATTAGGT CGTCTGGGGG TAGAGGCGCT AAGTCGTGAG GGACGCGACT GGCAATCGTT TGCGAAGGGC GATCCCTCTG CTCCCCATTT CTTTGCAGAA ACAGGTCATG CGATTGCGCC GGAGTTTTGG GGATACTGGT CAAGCCATGG AATAGAAATG GACGGCAAGG CTGGTTTTTC CTTTGCTGAG AGTCTTGCGC TATTCGGGTA TCCGATCTCT GAAGCGCAGA TCGAAAAGGG GCGTCTGACG CAATGGTTTG AGCGAGCGCG TTTTGAATAT TTTCCCGAGT TTGAAGGGAC GCCATATGCC GTGCAGCTGG GTCTTTTAGG AAGTGAAATA GCATCTGAAC GTAAAGGAGA AGAACCATTT CTTGCAACAA ATGCCCTCGA TACGGCGCAT GCCGCTGGAC AGCGGATGTT GCTGGCTACC GGTCAGGCGC TTCAGCGTCC ACTTGTGTCA CGTCCAGAAT TGCAGGCGGA GGTGGATCGC GCTGCCGCTG ACTGGCATCA TGCATTTACT ACAGGAGGTG ACACACATTC GCCGATGATC CGTGTACGCG CAACATACGC CAGCCGGGGG AATTATCTCG CACCGTCAAT GTGGGGTATT CATCCACATG ATCCAATTGG TGGAACCACG GGAAAAGAGC AGTCTGATTT CTCTTACGGT TTTTTCGAGT TCTCAAAGCT GACGATTGGA GTGTACTATC ACGAACATCT GAATACTCCT TCGGTTACTA TGATGTTCAT ACCTGAGCCC TGA
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Protein sequence | MYSCVLVRLF IVAAIVMSFV PSFAGSVSAQ PTSTRRPCSL DDPSGWVTCS PYYLYRRTKD VYFTRYYPET GHNLYLPFLK YWDRMGSLPV FGYPISEAFL EQIEGRWYMV QYFERQRFEW HYDPDNPEHR SSIGLEAEYW LPLAQSVRLG RLGVEALSRE GRDWQSFAKG DPSAPHFFAE TGHAIAPEFW GYWSSHGIEM DGKAGFSFAE SLALFGYPIS EAQIEKGRLT QWFERARFEY FPEFEGTPYA VQLGLLGSEI ASERKGEEPF LATNALDTAH AAGQRMLLAT GQALQRPLVS RPELQAEVDR AAADWHHAFT TGGDTHSPMI RVRATYASRG NYLAPSMWGI HPHDPIGGTT GKEQSDFSYG FFEFSKLTIG VYYHEHLNTP SVTMMFIPEP
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