| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3734 |
|---|
| Symbol | |
|---|
| ID | 5541236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4899496 |
|---|
| End bp | 4901364 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640895845 |
|---|
| Product | chaperone protein DnaK |
|---|
| Protein accession | YP_001433792 |
|---|
| Protein GI | 156743663 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000103994 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGA TCGTAGGCAT CGACCTGGGC ACGACCAACT CGGTCGTTGC GGTGATGGAA
GGCGGCGATC CGGTCGTCAT TCCGAACGCC GAAGGCAACC GCACCACGCC GTCGGTTGTG
GCGTTCACCA AAAACGGCGA GCGCCTGGTT GGGTTGACGG CGAAGCGTCA GGCGACGATC
AATCCTGAGA ATACATTCTA TTCGATCAAG CGTTTTATCG GGCGCAATTT CGACGAAACC
ACCGTCGAGC GCGAAATGGT GCCGTTCAAA GTCGTGAAAG GACCGCGCAA CGACGTGCGC
GTCTATGCGC CGACCACCGG CAAAGAGTAT GCGCCGCAGG AAATTTCGGC GATGGTGTTG
CAGAAACTCA AGACCGACGC CGAAGCCTAC CTGGGTGAGC CGGTGACAAA GGCGGTCATT
ACGGTTCCGG CATACTTCAA CGACAGTCAG CGCCAGGCGA CGAAAGACGC CGGCAAGATC
GCGGGGCTTG AGGTGCTGCG CATCATCAAC GAGCCAACTG CCGCCGCGCT GGCGTATGGT
CTCGATAAGA AGAAGGACGA GACGATCCTG GTGTTCGATC TTGGCGGCGG CACGTTCGAC
GTGTCGGTGC TCGAAGTCGG CGATGGCGTG GTCGAAGTCA AAGCCACCAA CGGCGACACA
CACCTCGGCG GCGACGACTA CGACCAGCGG ATCGTCAACT GGTTGATCGA CGAGTTCCGC
AAGGATCAGG GGATCGACCT GAGCAAGGAT CGCCAGGCGT TGCAGCGCCT GAAGGAAGCC
GCTGAAAAGG CGAAGATCGA ACTGTCGAGC ATGTCGGAGA CGGAGATCAA CCTGCCGTTT
ATCACGGCGG ACGCCAGCGG TCCGAAGCAT TTGCAAATGC GCCTCAGCCG CGCAAAGTTC
GAGCAGTTGA CTGCCGACCT GACCGAGCGC CTGAAGGGTC CGTTCTTCCA GGCGTTGAAG
GACGCCGGTC TAAAGCCGAA CGACCTCGAT GAAGTCGTGC TGGTGGGTGG TTCGACCCGT
ATGCCGGTGG TCATCGACCT GGTGCGCAAA CTGACGGGCA AGGAGCCGAA CCGCAGCGTC
AACCCGGACG AGGTTGTGGC GATTGGCGCA GCGATCCAGG CAGGTGTGCT CGGCGGCGAC
GTGAAGGACG TGGTGTTGCT CGACGTGACG CCGCTCTCGC TCGGCGTCGA GACGCTCGGC
GGCGTGATGA CGAAACTGAT CGAGCGCAAC ACGACCATTC CGACCCGCAA GAGTGAGATC
TTCTCGACGG CTGCTGACGG GCAGACGGCG GTGGACATCC ACATCTTGCA GGGCGAGCGC
GAAATGGCCG CCGACAATAT GACGCTGGGG CGCTTCCGGC TCGAAGGCAT TCCGCCTGCG
CCGCGCGGCG TGCCGCAGAT TGAAGTGACC TTCGACATCG ACGCCAACGG CATCCTGAAC
GTGTCCGCCC GTGATAAGGC GACCGGCAAG GAGCAGCGGA TCACGATTAC GGCCAGCACG
AACCTGTCGA AGGAAGAGAT CGAGCGGATG GTTCGCGATG CCGAACTGCA CGCTGCCGAG
GACAAGCGGC GGCGCGAACT GGTCGAACTT AAGAACCAGT CCGACAGCCT GGCATACCAG
AGCGAGAAGT CGCTGAACGA ACTCGGCGAT AAAGTCGATC CGGCGCTCAA GAGCCGCATC
GAAGGTCTGA TCAAGGACCT GCGCGAGGCG ATCAGCCAGG AGAATGAGAG CCGTATGCGG
TCAATCTCGG CGGAGTTGCA ACAGGCGATG TACCAGGTGT CGCAGAGCGC TTACACCGGC
GGCAACGGCG ACGGCGCGCG CAAAGGCAAG GACGAAGGGG TCGTCGAGGG CGAGTATACC
GTCGAGTGA
|
|---|
| Protein sequence | MSKIVGIDLG TTNSVVAVME GGDPVVIPNA EGNRTTPSVV AFTKNGERLV GLTAKRQATI
NPENTFYSIK RFIGRNFDET TVEREMVPFK VVKGPRNDVR VYAPTTGKEY APQEISAMVL
QKLKTDAEAY LGEPVTKAVI TVPAYFNDSQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG
LDKKKDETIL VFDLGGGTFD VSVLEVGDGV VEVKATNGDT HLGGDDYDQR IVNWLIDEFR
KDQGIDLSKD RQALQRLKEA AEKAKIELSS MSETEINLPF ITADASGPKH LQMRLSRAKF
EQLTADLTER LKGPFFQALK DAGLKPNDLD EVVLVGGSTR MPVVIDLVRK LTGKEPNRSV
NPDEVVAIGA AIQAGVLGGD VKDVVLLDVT PLSLGVETLG GVMTKLIERN TTIPTRKSEI
FSTAADGQTA VDIHILQGER EMAADNMTLG RFRLEGIPPA PRGVPQIEVT FDIDANGILN
VSARDKATGK EQRITITAST NLSKEEIERM VRDAELHAAE DKRRRELVEL KNQSDSLAYQ
SEKSLNELGD KVDPALKSRI EGLIKDLREA ISQENESRMR SISAELQQAM YQVSQSAYTG
GNGDGARKGK DEGVVEGEYT VE
|
|---|
| |