| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3724 |
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| Symbol | |
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| ID | 5541226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4881815 |
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| End bp | 4882696 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895835 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001433782 |
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| Protein GI | 156743653 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.776439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00193813 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAAGT CGACCTGGAC GACAAAGGTC GGCCTGGCAC AGATGCTCAA GGGCGGCGTC
ATCATGGACG TAGTGACGCC GGAGCAGGCG CGGATTGCCG AAGAAGCTGG CGCAGTGGCG
GTAATGGCGC TGGAGCGGGT TCCTGCCGAT ATTCGGGCGC AGGGCGGTGT GGCGCGGATG
AGCGACCCGG AGCTTATTCT GGCAATCAAA GAAGCAGTCA CTATTCCGGT GATGGCGAAA
GCACGCATCG GGCACTTTGT CGAGGCGCAG GTTTTAGAGG CGCTGGGGAT CGACTATATC
GACGAGAGTG AAGTGCTGAC GCCGGCGGAC GAAGAGCATC ACATCAACAA GCACAAGTTC
CGCATCCCGT TTGTGTGCGG CTGCCGCAAC CTGGGCGAAG GATTGCGCCG CGTGGCGGAA
GGCGCCGCGA TGTTGCGCAC CAAGGGTGAA GCCGGCACGG GAAATGTCGT CGAGGCGGTG
CGCCATGCGC GCGCGGTCTA TAGCGAAATT CGCCGCCTGC AAACGATGGA TGAAGACGAA
CTCTTTACCT ATGCCAAGAA CATCCAGGCG CCATACGAAT TGGTGCGCCA GGTGGCGGAG
AGCGGGAGGT TGCCGGTCGT GAACTTTGCC GCTGGCGGCA TCGCAACGCC TGCCGATGCA
GCGTTGCTCA TGCAGTTGGG TGTGGATGGC GTGTTTGTCG GTTCGGGCAT CTTCAAGTCG
GGCGATCCGG CGCGGCGCGC GCGCGCTATC GTTGCTGCAA CGACGCACTA TAACGAACCG
GAGATCATCG CCGAAGTCAG CCGTGGGCTT GGCGAGGCGA TGGTGGGAAT CGAGATCGGC
AAGATTCCGC GCGATCAGTT GATGGCGGGG CGTGGCTGGT AG
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| Protein sequence | MDKSTWTTKV GLAQMLKGGV IMDVVTPEQA RIAEEAGAVA VMALERVPAD IRAQGGVARM
SDPELILAIK EAVTIPVMAK ARIGHFVEAQ VLEALGIDYI DESEVLTPAD EEHHINKHKF
RIPFVCGCRN LGEGLRRVAE GAAMLRTKGE AGTGNVVEAV RHARAVYSEI RRLQTMDEDE
LFTYAKNIQA PYELVRQVAE SGRLPVVNFA AGGIATPADA ALLMQLGVDG VFVGSGIFKS
GDPARRARAI VAATTHYNEP EIIAEVSRGL GEAMVGIEIG KIPRDQLMAG RGW
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