Gene Rcas_3723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3723 
Symbol 
ID5541225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4881196 
End bp4881765 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID640895834 
ProductSNO glutamine amidotransferase 
Protein accessionYP_001433781 
Protein GI156743652 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00181067 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGTAG GAATTCTGGC GCTTCAGGGG GATTTCCGCG AGCACGAAGA GATGCTACGG 
CGCATTGGCG CGCCGACCCT CCAGGTGCGG TTGCCAAAAC ATCTCGACCG GGTCGAGCGG
TTGATCATTC CCGGCGGCGA AAGCACCACG ATCGGCAAGT TGCTGGCGAT GTATGGGTTG
ATCGAGCCGC TGCGCGCGCG TGTGCGCGAG GGGATGCCGA TCTGGGGGAC GTGCGCTGGC
GCGATTCTGA TGGCGCAGCG CATCGCTGAT GGGCGCGCCG ATCAGCCGTC GTTGCGCCTG
ATGGCGGTGA CGGCGCGGCG CAATGCCTTT GGTAGTCAGC TCGAAAGTTT CGAGATCGAT
CTGCCGGTCG AAGCGTTGGG CGGCGAGTCG CTGCGGATGG TGTTCATTCG CGCACCGGTG
CTCGAGGATT TGGGCGACGA TGTGACACCG CTGGCGCGAC TCGAAGATGG GCGCGTCGTC
GCTGCGCGCC AGGCGAATAT GCTGGCGACC TGTTTTCATC CAGAATTGAC ATCGGATGAA
CGAATGCACC GCTATTTTCT GGAGATGTGA
 
Protein sequence
MTVGILALQG DFREHEEMLR RIGAPTLQVR LPKHLDRVER LIIPGGESTT IGKLLAMYGL 
IEPLRARVRE GMPIWGTCAG AILMAQRIAD GRADQPSLRL MAVTARRNAF GSQLESFEID
LPVEALGGES LRMVFIRAPV LEDLGDDVTP LARLEDGRVV AARQANMLAT CFHPELTSDE
RMHRYFLEM