Gene Rcas_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3706 
Symbol 
ID5541208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4859124 
End bp4859483 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content62% 
IMG OID640895817 
Producthypothetical protein 
Protein accessionYP_001433764 
Protein GI156743635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000772559 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000130225 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGAAGC ATGATCTCAG TTTCACGCTC GACTTTCCAA ACGATGAGCG TGAGTCCTTA 
CCGGCGCTTC TCCGCGCTGC GGGCGCTGAA GTTCAGCGCG AACCCACCAG AGACATCGAC
TGGCAGACGG TCGTGGTTGT GATCGACGAG ATCGGCAGGG TAGCGACCGG CGTGACCGCT
GCCATCGTGC TCGCCGAGAA GATTGCCGAG AAACTGAACG CCTGGCGCGC GACGATGCGC
CGTCAGGGAA AGACTCCGCG CGCCGTGCTG CGCCGTCCCG GGCAACCGCC ACTCGATCTT
TCCACTGCAA CCGATCAAGA GGTGCTGGCA TGGCTGCTCA AAACATCGCC GCGCCCGTGA
 
Protein sequence
MTKHDLSFTL DFPNDERESL PALLRAAGAE VQREPTRDID WQTVVVVIDE IGRVATGVTA 
AIVLAEKIAE KLNAWRATMR RQGKTPRAVL RRPGQPPLDL STATDQEVLA WLLKTSPRP