Gene Rcas_3699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3699 
Symbol 
ID5541201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4835683 
End bp4836588 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content62% 
IMG OID640895810 
Producthypothetical protein 
Protein accessionYP_001433757 
Protein GI156743628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000917613 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAATCGG CTTACAGGAT ATACGAGTTG ATCGTCGTAT TGATTTGGGT TCTATCGAAT 
AGCGGATGTC AAGCGGCGCC CGTTGCCACG CCAACAGCGC CCCCCACTGC GACCGCAACG
GCTGCCCTGG CGCCGACGGC GACGACAGAG CCAACATCGG CCACTGCCTA TGCCCACGAG
CAAGTGATTC GCTTCGACAG CGAGCCGCTT GACTTTATGG CTGAAGGCGC AGTGCTGGGC
GGCCAGCGCG ACCGTTACGA ATTGCAAGTC GTGCCGGGCG AGATGTTGGA TGTGTGGCTG
ATGTCATTGG AAGGCAACGC CGTGCTGAGT ATTCTGGGCC CCGATGGCGC ACCGCTGCCG
GGCACCGAAG AGGGACGAGA TGTGACCCGC TGGACGGTCA TTCTGCCTGC TGGCGGCGCG
CACAGCATCG TAGTCGGCTC AACGCGCGGC AACGCCTCCT ACACGCTCTC GGTGCATACG
GCGATACCTG CTTATCAGCC GCTCTTGCTC CAGGATTGCC AAAAGCTCCA GGCAGACCTG
ACGCGCGCCT TTGGGATGCG TTTCACCCTC ATTGACACGC CATTTACCGA TCCGATCACC
GGGGCGAGCG GCATGGCCTG TACTCTGGAA GCCAACGGCA CCGGTGCCGA TTTCGGCGCG
CTCCCCGAAG TGATGACCAA AGTGCGCAGT GTTTTGGCCG GCTGGCAGGA GAATCCACTC
TACGCGGCCG ATAGCCCCAC GGCTTCGATG ACGGCGTTCA CGCGGGATAG GGCGCTGCTG
GTGGCGATGA CATCCTGGGA ACCCCGCGCC GATGCCGATT GCCCGACGGA TCAGCCGATT
TCGGCCTGCC CACTCACGCC GGAGCAACAA CTGTTCAGCG TGCGGCTGCA AGGGGTTCAA
TATTGA
 
Protein sequence
MKSAYRIYEL IVVLIWVLSN SGCQAAPVAT PTAPPTATAT AALAPTATTE PTSATAYAHE 
QVIRFDSEPL DFMAEGAVLG GQRDRYELQV VPGEMLDVWL MSLEGNAVLS ILGPDGAPLP
GTEEGRDVTR WTVILPAGGA HSIVVGSTRG NASYTLSVHT AIPAYQPLLL QDCQKLQADL
TRAFGMRFTL IDTPFTDPIT GASGMACTLE ANGTGADFGA LPEVMTKVRS VLAGWQENPL
YAADSPTASM TAFTRDRALL VAMTSWEPRA DADCPTDQPI SACPLTPEQQ LFSVRLQGVQ
Y