Gene Rcas_3691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3691 
Symbol 
ID5541193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4829376 
End bp4829879 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content48% 
IMG OID640895807 
Producthypothetical protein 
Protein accessionYP_001433754 
Protein GI156743625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00235213 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000662045 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCATCGG ATTTTGTTGA GATTCACGGC CTATTCCGAC CGAACCCGAT AGTGGACTCG 
TTGCAACGCA TTGATCGCCT TCTTGGAATT TTCGAAGTAC TTTCGGGTTT TATACCCCAG
GTTTCCAGCC AATCGTCAGG AAAGAAAGGC CCGCAAGATG AAAAGAAGCA AATGAAGCTA
TTCCGCCAGT TTCTTCAGGG TATTTTGGCG GATATTGAAG CAAAAAACAC CCGAGTTTTT
GTGATTGATA CGGCTGAGCC AAATCAGTTT CAAGTTGTGG TTCTTTTGTT CGCAGACTAT
CTCCGTGACC GGACAATGGC TGAGATTGCT TACAAGGAAT ATCGTTTGCT TGGTAAGGTT
GTGCGCAAGA TAGAGCAAGG CTCTGACGAA ACCGTTGACC TTTTGCGAGG CACGGCATTG
GGTGGTGTGG GGAGAGAAAC TCTTGAACAG CTCACTGGTG TACGTGCTCG CGTACCGTTC
TATCTGGAGG GCGTGGCGGT ATAG
 
Protein sequence
MPSDFVEIHG LFRPNPIVDS LQRIDRLLGI FEVLSGFIPQ VSSQSSGKKG PQDEKKQMKL 
FRQFLQGILA DIEAKNTRVF VIDTAEPNQF QVVVLLFADY LRDRTMAEIA YKEYRLLGKV
VRKIEQGSDE TVDLLRGTAL GGVGRETLEQ LTGVRARVPF YLEGVAV