Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3691 |
Symbol | |
ID | 5541193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4829376 |
End bp | 4829879 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640895807 |
Product | hypothetical protein |
Protein accession | YP_001433754 |
Protein GI | 156743625 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00235213 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000662045 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCCATCGG ATTTTGTTGA GATTCACGGC CTATTCCGAC CGAACCCGAT AGTGGACTCG TTGCAACGCA TTGATCGCCT TCTTGGAATT TTCGAAGTAC TTTCGGGTTT TATACCCCAG GTTTCCAGCC AATCGTCAGG AAAGAAAGGC CCGCAAGATG AAAAGAAGCA AATGAAGCTA TTCCGCCAGT TTCTTCAGGG TATTTTGGCG GATATTGAAG CAAAAAACAC CCGAGTTTTT GTGATTGATA CGGCTGAGCC AAATCAGTTT CAAGTTGTGG TTCTTTTGTT CGCAGACTAT CTCCGTGACC GGACAATGGC TGAGATTGCT TACAAGGAAT ATCGTTTGCT TGGTAAGGTT GTGCGCAAGA TAGAGCAAGG CTCTGACGAA ACCGTTGACC TTTTGCGAGG CACGGCATTG GGTGGTGTGG GGAGAGAAAC TCTTGAACAG CTCACTGGTG TACGTGCTCG CGTACCGTTC TATCTGGAGG GCGTGGCGGT ATAG
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Protein sequence | MPSDFVEIHG LFRPNPIVDS LQRIDRLLGI FEVLSGFIPQ VSSQSSGKKG PQDEKKQMKL FRQFLQGILA DIEAKNTRVF VIDTAEPNQF QVVVLLFADY LRDRTMAEIA YKEYRLLGKV VRKIEQGSDE TVDLLRGTAL GGVGRETLEQ LTGVRARVPF YLEGVAV
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