| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3646 |
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| Symbol | |
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| ID | 5541148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4770837 |
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| End bp | 4772360 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895766 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001433713 |
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| Protein GI | 156743584 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00027326 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTCAC CGCTCGTTTC GATCATCATC CGGGCGCGGA ATGAAGCGCC TGCGCTGCGA
CGCCTCTTGC CTCTGCTCCA ATCGCAGGAG GTTGATTTTC CGTTCGACAT CTGGCTGCTG
GATAACGACT CGCAGGATGA GAGCGCAACT CTGGCGCGCG CGTATGGTCT CCGGTATCAC
CATATTCCGC GCGGCGGGTT CAACTATGCG GCGGCGCTCA ACCTGGGCGC ATCGCTGGCG
GAAGGCGAGT TTATCGTCAG TCTGTCGGCG CACTGTTTTC CGCAACGCAG TGACTGGCTG
GCGGCGCTCG TGGCGCCGTT GCGCGCGGAT CGCAACGTTG TCGCCGCTTA CGGTCGGCAG
GTCATTGATC CGCAGAGCGG CGCATTCGAG GCGCATGGCA ATGCTGAGTT GTTTCCGGCA
GATGCGCGCC AGCCGAAGAT CGTCGCATTC TCGAACGCCA ATAGCGCCAT TCGGCGCGAT
TATCTCTTGA TCCATCCCTT CAATCCGGCG ATCAAGATTC TGGAGGATCA CCTGTTCTAT
CTGGAGATCG CCGGGGATTT CGATGTGGTC TATGTGCCCG AAGCCGTCGT GCTCCATGAG
CATGATCGCT TTTCGTGGCG TTACTATGTG CGACGCTGGA TACTGGAGGG ATGGTCGTTC
TATTTTTTGA CGCGCCATCG CGGGTTGCCG TCGCCCTATA TTCCGCAACG GCTCGTTTCT
CTCCGCCGAT TGCTGTTCAT CTATCCGCGC ATCGCCGTCG CATATGCGCG GCGTGGTCGG
TGGGCGCCGG CGCTGCGCGC CATTCCCTTC TTCTGGCTGC GCGATCTGAT CTGGCTGGCG
AGTTTTGTGC GCGCCCGCCT GCTCCACCCG GTCATGGCGC AGACTGATAC GGCGCTGCTG
CTGCGCACCA ATCGGTTTTT GCGCCGTCAG GCGATGCAGC AGTCGCGCAT GACGCTTCCC
GACGCGCCGC TCGACTGGCG CGAGGAATGG CAACTCAAGG CGGATTGGGG GTTTATCCGG
CGGAATATTG CCGATTTCAT TCGTTTGTGC CACGAACGCG GGTTGTTTGC CAGTCCGCTG
CTGGAAGTCG GCGCATCGGG GCAGAACGAC TACCTGGCGG AGTGGTATGA CATGCGCACC
TCCAATCTGG CGTCGAACCT GCACAGCGCG GACATGGCGC TCGATATGGA GGATATGCGC
CAGATCGCCG ATAATTCGCT CGGTTCGATT CTCTGTTCAG AGGTGATCGA GCATGTGCGG
CATCCTGAGC GCGCGATTGC GGAAGCGTTT CGCGTGTTGC GTCCAGGCGG CACGCTGATC
ATTACAACGC CGTACAACAT TGTGATTCAC AACACCCCCG AAGATGGCGG CTTCCACGGG
CGCAACTTCA CGCCGCAGGG GTTAGAGTTG ATTCTGCGCG AGGCGGGGTT CGATATTGTG
CTGCTCGAAA CGCGCGGCGC TACTGAGATG CGCCGTCGTC TGATGCCGAG CAATGTGTTT
GCAGTGGCGC GGAAGCCGGG GTGA
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| Protein sequence | MTSPLVSIII RARNEAPALR RLLPLLQSQE VDFPFDIWLL DNDSQDESAT LARAYGLRYH
HIPRGGFNYA AALNLGASLA EGEFIVSLSA HCFPQRSDWL AALVAPLRAD RNVVAAYGRQ
VIDPQSGAFE AHGNAELFPA DARQPKIVAF SNANSAIRRD YLLIHPFNPA IKILEDHLFY
LEIAGDFDVV YVPEAVVLHE HDRFSWRYYV RRWILEGWSF YFLTRHRGLP SPYIPQRLVS
LRRLLFIYPR IAVAYARRGR WAPALRAIPF FWLRDLIWLA SFVRARLLHP VMAQTDTALL
LRTNRFLRRQ AMQQSRMTLP DAPLDWREEW QLKADWGFIR RNIADFIRLC HERGLFASPL
LEVGASGQND YLAEWYDMRT SNLASNLHSA DMALDMEDMR QIADNSLGSI LCSEVIEHVR
HPERAIAEAF RVLRPGGTLI ITTPYNIVIH NTPEDGGFHG RNFTPQGLEL ILREAGFDIV
LLETRGATEM RRRLMPSNVF AVARKPG
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