Gene Rcas_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3642 
Symbol 
ID5541144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4764581 
End bp4765648 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content52% 
IMG OID640895762 
Productmethyltransferase type 11 
Protein accessionYP_001433709 
Protein GI156743580 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000500593 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000779954 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATGATT CTCAAGTGTA TGTTCCGAAA AACTATCAGT ACTGGCGTGA CCATGGGAGT 
GAATGGTTTG ATGAGTATGA GCGACGCCAG AAATATATGC TCTGTTATCA TATTCAGAGG
GTTATGCTCG CAGACTATAT GCGGCATAGC CGTCCTGCTC GTGTGATCGA ATTTGGTTGT
GGTCCCGGTC GTCATCTCAA GTATCTGAGC CGGATTGAGG GTATTGATGT GTATGGATAT
GATCAAAGTG CCGCTATGGT CTCAGGGTGC CTTCGGTGGA CTACGTCGGA GTGGATCGCA
GAGCATGTGA TCGTAGGTGA ACCGGTTGGT CCTTTGCCGT ATCCTGACCG ACATTTCGAT
ATCGTCTACA CCGTCGAGGC ATTGATTCAC ACGCGTCCAG AGGATGTAGG TGTAGTACTC
GCGGAGCTGG TGCGTGTGAG CAAGTGGCAA GTGCTTCATC TGGAACCTGC TCAAGGGGTT
CAGATCTTCG AAGATGCGCA CGATGGTTCC TGGTGTCACG ACATTGTGGC TGCGTATCGT
CAGTTGGGGT ATGAATGTGA GGTTTTGCCA TCAGGGTATA TCGTTCAGCA ACCGTATCGG
GTTATTCTTG ATCCTGCTCG TCCAGTCTAC ACATGGCCGT CAGATATGCT GGACCTGTTG
CGCAGGATGG AGTCTGACAT ACAACCGACA CTCGACCAGT TGGCGCAGAA CATCAATGAT
TTGTCTTCAC AAATTGTAAA TCTACGGGCA GAGCTGGCGG AGGCGGAGGC GCGGGGACGG
CAGATGCAGC AGCAGTGGGA GGCGACGCAG GCGGCGCTGA AGGAGGAACA GCGAAAAAAC
AGACAGTTGG CGCAGAACAT CAATAATTTG TCTTCACAGA TTGTAAATCT ACGGGCAGAG
CTGGAGGAGG CGGAGGCGCG GGGACAGCAG ATGCAGCAGC AGTGGGAGGC GACGCAGGCG
GCGCTGGAGG AGGAACAGCG AAAAAACAGA ATATTGATGT ATCAGCAGGC TCGCTTTGAG
GAATTCATCA ATCAGTTGCG GCATGCTCTA AAGATGCCGA TAGAATGA
 
Protein sequence
MNDSQVYVPK NYQYWRDHGS EWFDEYERRQ KYMLCYHIQR VMLADYMRHS RPARVIEFGC 
GPGRHLKYLS RIEGIDVYGY DQSAAMVSGC LRWTTSEWIA EHVIVGEPVG PLPYPDRHFD
IVYTVEALIH TRPEDVGVVL AELVRVSKWQ VLHLEPAQGV QIFEDAHDGS WCHDIVAAYR
QLGYECEVLP SGYIVQQPYR VILDPARPVY TWPSDMLDLL RRMESDIQPT LDQLAQNIND
LSSQIVNLRA ELAEAEARGR QMQQQWEATQ AALKEEQRKN RQLAQNINNL SSQIVNLRAE
LEEAEARGQQ MQQQWEATQA ALEEEQRKNR ILMYQQARFE EFINQLRHAL KMPIE