| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3626 |
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| Symbol | |
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| ID | 5541128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4735169 |
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| End bp | 4736410 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895746 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001433693 |
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| Protein GI | 156743564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.348332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCA CACCGTCGCA GCGTAGCGCG TTTGCCGCAA GGACATTCGC AGCGTTACGG
CATCGTAATT ATCGCCTCTG GTTCTTCGGG CAGATGGTAT CGCTCTTCGG CTCCTGGATG
CAAACCACTG CTCAGGGATT TCTGGTCTTT CAACTGACCG GTTCGCCCGC GTACCTGGGG
TATGTCGGGT TCGCCGCCGG CATTCCTGCG TGGGCGCTGA CTCTCTATGG CGGCGTGGTC
GCCGATCGTA TGCCGCGCCG AACTCTGCTG ATCATCACGC AGACGGCGCA GATGGCGCTG
GCATTCGCGC TGGCGGCGCT CGTGTTCAGC GGTATCGTCC AACCCTGGCA TATTGTCGCA
CTCTCGTTCC TGCTAGGGAT CGCCAATGCG TTCGACGCTC CGGCGCGCCT GGCATTCGTG
CGTGAACTGG TGGACAAGGA AGACCTGACG AATGGCATTG CGCTCAACGC GACGATGTTC
AACCTGGCGA CGACGACCGG ACCGGCGATG GCGGGGGTGA CCTACACTCT GGTGGGACCG
GCGTGGTGTT TCATGCTGAA CGGCATCTCG TTCCTGGCGG TCATTGGCGC GCTCTGGCGC
ATGCGGATGG CGCCGCAGCC GGTTGCGCCA CGCAGCGCCT CGGCGTGGCG CGACCTGCGC
GAGGGGTTGA GTTACATCCT GCACGAACCG GTGGTGCGCA CGCTGATTGC GCTGGTGGGG
GCGACGAGTT GTTTTGGCAT CTCGTTTGCG ACCCTCTTCC CGGCATGGGC GGTGCGCATT
CTGGGGGGCG ACGCCGCCAC AACCGGTCTC TTGCAATCGG CGCGCGGTCT GGGAGCGCTG
CTGGGAGCGT TGCTGATTGC GTCACTGGGG CGCTTTCAGT TCAAAGGGCG TCTATTGACA
GTCGGCACAT TTGCGTTCCC AACACTGCTC ATTGTGCTGA CCTTCACGAC CTGGCTGCCG
CTGACCCTGG TGCTCCTGAC GGCTTCGGGG CTGGCGGTGA TCCTGATCAT GAACCTGGCA
AATGCGCTGG TGCAGACGCT GACACCCGAT GCGCTGCGGG GTCGGGTGAT GGCGGTCTAC
AGCATGGTCT TTTTCGGAAT GATGCCAATC GGTGCGCTCT GGATCGGGGT GATCGCCGAG
CGAGCCGGTG AACCGACGGC AGTGATCAGC GGGGCGCTGG TGGTCCTGGG AGTCGCAGCG
CTCATACGTT TGGCTGTGCC GCAGATACGG AAGTTGACGT GA
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| Protein sequence | MTITPSQRSA FAARTFAALR HRNYRLWFFG QMVSLFGSWM QTTAQGFLVF QLTGSPAYLG
YVGFAAGIPA WALTLYGGVV ADRMPRRTLL IITQTAQMAL AFALAALVFS GIVQPWHIVA
LSFLLGIANA FDAPARLAFV RELVDKEDLT NGIALNATMF NLATTTGPAM AGVTYTLVGP
AWCFMLNGIS FLAVIGALWR MRMAPQPVAP RSASAWRDLR EGLSYILHEP VVRTLIALVG
ATSCFGISFA TLFPAWAVRI LGGDAATTGL LQSARGLGAL LGALLIASLG RFQFKGRLLT
VGTFAFPTLL IVLTFTTWLP LTLVLLTASG LAVILIMNLA NALVQTLTPD ALRGRVMAVY
SMVFFGMMPI GALWIGVIAE RAGEPTAVIS GALVVLGVAA LIRLAVPQIR KLT
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