Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3620 |
Symbol | |
ID | 5541122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4729684 |
End bp | 4730739 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895740 |
Product | permease |
Protein accession | YP_001433687 |
Protein GI | 156743558 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCAGA CATTATCGGC GTTATCACTA CGACATTCAT CACGGCGCGC ATGGGGTATT GTTGCCGTCG CTGCTGTTGG CTGGCTGATT GCGTACAACC TGATCCAACC GCTGGCGCAC TGGTTGGCAT ATCGGGTGCT GGGTTTTGCC GAGGGATCAC AGGCAGGCGA GGCGCTCGCC TTTTTTCTGT ACGACGTGCC AAAGATCCTG CTGCTGTTAA GTGGGATGAT CTTCGGCATC AGCGTCCTCC GTTCGTTCTT CAGTCCCGAA CGCACCCGCG CCCTGCTCGG CGGCAAGCGT GAGGGGATCG GGAACGCACT GGCAGCCGGG TTGGGCGTGC TCACACCATT TTGCTCGTGC TCGGCGGTGC CGCTCTTTAT CGGCTTTGTC GAAGCGGGCA TTCCGCTCGG TGTGACCTTC TCGTTCCTGA TTGCCGCGCC AATGGTGAAT GAGGTTGCGC TGGCAATGCT CCTTGGCATG TTTGGCTGGC AGGTAGCCCT ACTCTATCTG GTTGCCGGCA TGAGTGTGGC AATTCTATCC GGTATCGTTA TCGGGCGCCT GCGCCTGGAG CGCTACGTCG AGGATTTTGT CTGGCAGATC AAAGGCGGTG GCGGCGCCGT CGCAGGTGAA GCGCCGACAT GGGCTGAACG GTTTGCCTTT GCATGGGAGA ATACCCGTGA GATTGTCGGC AAGGTCTGGC TCTACGTCGT CATCGGGATT GCCATTGGCG CCGGCATTCA TGGCTACGTT CCCGAAGAAG CGCTGTCTGG CATCCTTGGG CGCGAGGCAT GGTGGTCGGT GCCGGCAGGC GTGATTCTCG GCGTGCCGCT CTATTCGAAT GCCGCCGGTG TAATCCCGGT GGTACAGGCG CTGATGGCGA AAGGCGCCGC TCTGGGAACG GCGCTTGCCT TTATGATGGC GGTCGTCGCC CTCAGTTTGC CCGAAATGAT CATTCTGCGC CGGGTACTCA AGCCACAGTT GATCGCCGTG TTTATCGGCG TGGTGGCCGT CGGGATCATG ATGGTTGGCT ATCTGTTCAA TCTGGTGATG GGCTGA
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Protein sequence | MEQTLSALSL RHSSRRAWGI VAVAAVGWLI AYNLIQPLAH WLAYRVLGFA EGSQAGEALA FFLYDVPKIL LLLSGMIFGI SVLRSFFSPE RTRALLGGKR EGIGNALAAG LGVLTPFCSC SAVPLFIGFV EAGIPLGVTF SFLIAAPMVN EVALAMLLGM FGWQVALLYL VAGMSVAILS GIVIGRLRLE RYVEDFVWQI KGGGGAVAGE APTWAERFAF AWENTREIVG KVWLYVVIGI AIGAGIHGYV PEEALSGILG REAWWSVPAG VILGVPLYSN AAGVIPVVQA LMAKGAALGT ALAFMMAVVA LSLPEMIILR RVLKPQLIAV FIGVVAVGIM MVGYLFNLVM G
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