| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3586 |
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| Symbol | |
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| ID | 5541087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4680656 |
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| End bp | 4682821 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895705 |
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| Product | CHAD domain-containing protein |
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| Protein accession | YP_001433653 |
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| Protein GI | 156743524 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5607] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAC AACGTGTCAA TCCCATCGAA GTCGAACTGA AGTTTCGCGT CGGCGATCCG
GCGATCTTTC GCGCGCTGTC GCGCCCGATG ACACTCGGCG ACTTTCAGTT GAAGCCGGTT
GGGGATGGCG AACATCAGCA CAACACGTAC TACGACACGC CCGATTTCCG GTTGCGCGCG
CAGCACTATG GGCTGCGGGT GCGCACTGTC GGTCATCACC GGATTGCGAC CCTGAAAGGC
GAAACCCAAT CGCGCGATGG TCTTCATCAG CGCCCTGAGT GGGAGATGCC TGTTGAGAGC
GACGATCCGC AACGCTGGTC CCCCGGTGAT GTGCGCGACC GCGCATTCGC GCTGGCAGGC
GGTGCGCCAC TCCAACCGGT GCTGACCATC GAAACCCTGC GGCGCCTGGT GTATGTCTGG
CAGGGTTCGC GGCGTGTTGC CGAAATTGCG CTCGATGAAG GGGTTATCTA TGCTGGCGGG
CGTGAGCAGA TGTTCTATGA ACTGGAGATC GAATTGCTGC CCGAAGGTAC TCGTGAAGAT
CTTGATACGC TCGGCGCACT CTTGCAGGCG CAATTTCCGC TGCAACCCGA CAATCTGAGC
AAACTGGCGC GTGGTTTGGC GTTGCTCGAT GAAGCGGTGT TGGATGCTGA GGATGCCGCA
AAACGTTTGA AAGGGGGCGA TGTGATATCT GCATCAACCG AACAGTCGCT TATCCGCCTT
CTGGCGTTGA CGCTGCTGGA TCGCGCGATA CCAGAGGGCG CCTTTCTGCC GGTTCACCGC
CGCCTGCTGG GGCTTGCTGC CGCCTGCTAC GACGCGGCGC TCGCTGCCGG TGTCGAAGTC
CCTGAGCGCG CTGCGCGCGA TATGGTGCTC TCGGCGCAAA TTGACGACCT GGATGCCGAT
CAGCAAGCGC TCGCCGCCGC ACTGCCAGGG ATGGTGCGCG CCAGAGTGCG CCCGCGTCGT
GATCCGGCGT TCATCCGCCT GAGCGAGAGC GATCAGAAGA TGGCGCTACG CCTCGGCGCA
ATCCTGCGCC TGGCGGCGGC GTTGGTGGAA CAGAGCATCC GCACGCTGGC GGTCGCGCAC
ACGAATGGCG CTGTTGCGCT GACCCTTGCG CCCGGAACTG ATGACGTTCT GGAACCGATT
ACTGCCCGCA GCGATCTCTG GCGCGATCAG ATCGGTCCTG TCACGTTCGC TGTTGTTGAA
CACGACGCGC TGGCGCCGCT GCCGGTCGAA CCACCTGATC CAGCATTCGC CGTTCTGAAA
CTGACCGACG GGTTGCAGGG AGGCGAACCG TTGACGGAAG GGGCGCGTCG GATGCTCCGC
CGCACCTTCG AGCGATTGCT TGCCCGGATC GATGCCGTTG CAAAGGACGA GGACCCGGAG
GATGTCCATG ATGCGCGGGT GGCAACCCGC CGCCTGCGCG CGTCGCTTCA GGTCGTCGAG
GGCATTTTCG ACCCCGATCT GGTGCGGGAA TTGCGTCGTG GGTTGCGGCG CGTGGCTCAG
TCGCTCGGCG TGGTGCGCGA TTATGATGTG TTCCTGGAAT CGGTGCGCGC ATTCCGTGAT
CAACTGCCGG AGGAGCGCCG GTCGATCACA GCGCCGCTCA TCGCCGCTAT CGAGTCGGTG
CGCGCGTCGG CGCGTGAGCG CCTGCTTGCG GACCTGGAAT CGAAGCGCTT TGGACGTTTT
CTTCGCCAAT GTGCGGCTTT TCTCACCACT CCCGGCGCCG GGGTTGTCGA TCAGAGCGAA
ACCGGTGCGC CGACGCGCGT GCGCGACTTT GCCGGCAGCG CCATCTGGCG ACGCTACGAA
CAGTGGCGCG CCTTCGACGC CGTGCTCGAC GGCGCATCTG ACGAGGTGCG TCATATGGCG
CGCATTGCCG GCAAACGCCT GCGCTACACG CTGGAGTTTT TCGCCGATGC GCTGGGTCCC
GGCGTCGATC AGGCGCTTGG TCCGCTGATG GAATTGCAGG AGTTGCTCGG TAACCTTCAG
GATGCCGCCG TTGCGCGGGC GCACATCCGC GCGCTTGGAC TGGCCGACGA TCCGGGCGCA
CAGGAGTATC TCGCAGCGCT CGACGCAGCG CACGACCGGT TGCTCGCCGG TTTCGCGCGG
TTGTGGGCAA AAGTTGACAG CGTCACCTAT CGGCGGCGAC TCTTTGAGTT GATTATTCGA
ATGTGA
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| Protein sequence | MDQQRVNPIE VELKFRVGDP AIFRALSRPM TLGDFQLKPV GDGEHQHNTY YDTPDFRLRA
QHYGLRVRTV GHHRIATLKG ETQSRDGLHQ RPEWEMPVES DDPQRWSPGD VRDRAFALAG
GAPLQPVLTI ETLRRLVYVW QGSRRVAEIA LDEGVIYAGG REQMFYELEI ELLPEGTRED
LDTLGALLQA QFPLQPDNLS KLARGLALLD EAVLDAEDAA KRLKGGDVIS ASTEQSLIRL
LALTLLDRAI PEGAFLPVHR RLLGLAAACY DAALAAGVEV PERAARDMVL SAQIDDLDAD
QQALAAALPG MVRARVRPRR DPAFIRLSES DQKMALRLGA ILRLAAALVE QSIRTLAVAH
TNGAVALTLA PGTDDVLEPI TARSDLWRDQ IGPVTFAVVE HDALAPLPVE PPDPAFAVLK
LTDGLQGGEP LTEGARRMLR RTFERLLARI DAVAKDEDPE DVHDARVATR RLRASLQVVE
GIFDPDLVRE LRRGLRRVAQ SLGVVRDYDV FLESVRAFRD QLPEERRSIT APLIAAIESV
RASARERLLA DLESKRFGRF LRQCAAFLTT PGAGVVDQSE TGAPTRVRDF AGSAIWRRYE
QWRAFDAVLD GASDEVRHMA RIAGKRLRYT LEFFADALGP GVDQALGPLM ELQELLGNLQ
DAAVARAHIR ALGLADDPGA QEYLAALDAA HDRLLAGFAR LWAKVDSVTY RRRLFELIIR
M
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