| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3585 |
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| Symbol | |
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| ID | 5541086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4678816 |
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| End bp | 4680633 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895704 |
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| Product | oligoendopeptidase F |
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| Protein accession | YP_001433652 |
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| Protein GI | 156743523 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAAA TGCAGAAGAT TCCGCGCCGT GACGAGATTC CTGAACAGTA CCGCTGGGAT
CTCACAACCA TATACCCGGA CGATGCCGCC TGGGAGCAGG ACATCGCCGC TATTGAGAGC
ATGCTCGGCG ATGTCGCTGC TCTCCAGGGG CGCGTCGCGC GCAGCGCCGA CGATCTGCTG
GCGGCGCTGC GCATGCGCGA TCAGGTGTCG ATGCGTCTCT GGCAGGTCTA CGTCTATGCC
AATCGGCGTT TCGATAGCGA CACGACCGAT CCAGTCGGGC AGGCGCTCGC CGAGCGCGCC
GGGACGCTGG CGGCAAAGGT AAGCGCCGCT CTTGCGTTTA TCGATCCGGA AATCCTCGTG
GCGCCGGAGG AGCAGATTCG CGCCTGGCTG CGGGACCATC CAGACCTGGC GGTGTATGAG
TATGCGCTGG ATCAACTGCT GCGCCAGCGT GATCATGTGC GCTCTGCGGA GGTTGAAGCC
ATCCTGGCGC AATTCAGCGA TATTACGCGT GCGCCGGGCG AAATCTTCGA GGTGTTGACG
AATGCCGACC TGAGTTTCCC GACGATTGAG GATGAACACG GGCAGACGGT GCAACTGTCG
CATGGGCGCT ACATGCGCTT GTTGCGCAGC CCTGACCGGC GGGTGCGTCG CGATGCCTTC
ATCGGGTACT ACAGCGCCTT CCAGGGAATT CGCAATACGC TTGGTGCGTC GCTTGCGGCT
CAGGTGCGCA CCCACGTGCT CAATGCGCGT GTGCGCAATT ATACGTCGTC ACTGGAAGCC
GCCCTGACGC CGAATGATAT TCCGGTCGAG GTCTACCACA ACCTGATTGC GACGGTCAAC
GCCAATCTGT CGCGTCTCCA CCGCTATCTC CGGTTGCGCC GGCGGATCAT GGGGTTGGAC
GAGTTGCACT TCTACGACCT CTACGCGCCG CTGGTTCCCG AAGCCGATGT TGCGGTTCCG
TATGCCGAAG GGGAGCGTCT GGTGCGCGCG GCGTTCGAGC CGCTCGGTGA GGAGTATGGC
GCTGCCATCG CGGAAGCGTT CGGCAACCGC TGGATCGATG TGTACGAGAA TGTCGGCAAG
CGCAGCGGAG CGTACAGCGA TGGCGCCTAT ACAACGGCGC CGTTCATGCT GCTCAATTAT
CAGGATCGCC TGAACGATGT GTTTACGCTG GCGCACGAAC TCGGTCATGC GATGCACTCG
TACTTCACGC GCAAGACGCA GCCGTATGTC TACGGCGATT ACACGATCTT TGTCGCTGAA
GTCGCTTCGA CGCTCAACGA GGCGTTATTG ACCGATTATC TGTTGCAGAC GCGCGATGAC
CCGACTCTGC GGCGTTATCT GATCGTCGAG CAGTTGGAGG ACATCCGCAC GACTCTCTTC
CGTCAGACGA TGTTCGCTGA GTTTGAACTC GAGATTCATC GCCGTGCAGA GGCGGGTGAG
CCGTTGACGA CCGAACTGTT CAGCACGATC TATCGCAATC TTGTGGCGCG CTACCACGGC
TCGGACGTGA TGCTCGATGA GCAGATTGCA CTGGAGTGGG CGCGGATCCC GCACTTCTAC
TACAACTTCT ACGTCTATCA GTATGCCACG GGTCTGTCGG CGGCGCTGGC GTTGCATGCG
CGCATCGTTA ACGAAGGGCG TCCGGCAATC GAGCGGTATC TGCGCTTCCT CCGCAGCGGG
TCGTCACGTC CCTCCATCGA ATTGCTGCGC GATGCCGGTG TTGATATGCT CTCACCTGCC
CCCATTCAGG CGGCGATGGA TCATTTCGAT GCATTGCTCG GCGAGTTGGA GCAGATGACG
GCAGGCGCGC AGCAGTGA
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| Protein sequence | MTEMQKIPRR DEIPEQYRWD LTTIYPDDAA WEQDIAAIES MLGDVAALQG RVARSADDLL
AALRMRDQVS MRLWQVYVYA NRRFDSDTTD PVGQALAERA GTLAAKVSAA LAFIDPEILV
APEEQIRAWL RDHPDLAVYE YALDQLLRQR DHVRSAEVEA ILAQFSDITR APGEIFEVLT
NADLSFPTIE DEHGQTVQLS HGRYMRLLRS PDRRVRRDAF IGYYSAFQGI RNTLGASLAA
QVRTHVLNAR VRNYTSSLEA ALTPNDIPVE VYHNLIATVN ANLSRLHRYL RLRRRIMGLD
ELHFYDLYAP LVPEADVAVP YAEGERLVRA AFEPLGEEYG AAIAEAFGNR WIDVYENVGK
RSGAYSDGAY TTAPFMLLNY QDRLNDVFTL AHELGHAMHS YFTRKTQPYV YGDYTIFVAE
VASTLNEALL TDYLLQTRDD PTLRRYLIVE QLEDIRTTLF RQTMFAEFEL EIHRRAEAGE
PLTTELFSTI YRNLVARYHG SDVMLDEQIA LEWARIPHFY YNFYVYQYAT GLSAALALHA
RIVNEGRPAI ERYLRFLRSG SSRPSIELLR DAGVDMLSPA PIQAAMDHFD ALLGELEQMT
AGAQQ
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