| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3576 |
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| Symbol | |
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| ID | 5541077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4668687 |
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| End bp | 4669436 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895695 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001433643 |
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| Protein GI | 156743514 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0342518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.283841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCG AAGCGTGTGT CTATGAGCGT CCGGTGGGGT TGACGGCGGC GCCGACGCAT
TATTGTCCCG GTTGCACCCA CGGTATTGCT CACCGGTTGA CGGCGGAGGT TCTGGAAGAA
CTCGGCATTC TGGGGTGCAC GATTGGCGTC GCCTCCGTCG GTTGCTCGGT GTTTGCCTAC
AACTATATCG CCTGCGATTT CGTCGGCGCG GCGCATGGGC GCGCCCCGGC AGTCGCAACC
GGCTTGAAGC GGGTGTTGCC CGACCGGATC ATTTTCACCT ACCAGGGTGA CGGCGACCTG
GCATCGATTG GATTGGGCGA AGTGTTGCAC GCTGCTGCGC GGGGTGAACT GATCACGGTT
CTTTTCATCA ACAATGCGAT CTATGGCATG ACTGGCGGGC AGATGGCGCC AACATCGCCA
GCCGGCATGG TGACGACCTC ATCACCAGGA GGGCGCGATC CGCAGTTGAT GGGGCATCCG
GTGCGGGTGT GCGAACTGGT GGCGCAGATG GATGGCGCCG TCTATGTGGC GCGTCGCAGC
CTGCACAACC CGGCGGAGAT CCGCAAGGCG AAGAAGGCGC TACGCACTGC ATTTGAGTGT
CAGTTGGCCG GTCGCGGATT TGCGCTGGTT GAACTGCTCT CTACCTGCCC GACGAACTGG
GGCATGACGC CGGTTGACGC CCTTCGCTGG GTCGAGGAGC GGATGATACC GGTGTTTCCA
CTGGGAGAGT TCAAGGGAGG TGAGAGGTGA
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| Protein sequence | MIAEACVYER PVGLTAAPTH YCPGCTHGIA HRLTAEVLEE LGILGCTIGV ASVGCSVFAY
NYIACDFVGA AHGRAPAVAT GLKRVLPDRI IFTYQGDGDL ASIGLGEVLH AAARGELITV
LFINNAIYGM TGGQMAPTSP AGMVTTSSPG GRDPQLMGHP VRVCELVAQM DGAVYVARRS
LHNPAEIRKA KKALRTAFEC QLAGRGFALV ELLSTCPTNW GMTPVDALRW VEERMIPVFP
LGEFKGGER
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