| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3554 |
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| Symbol | |
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| ID | 5541055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4639589 |
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| End bp | 4640383 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895673 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001433621 |
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| Protein GI | 156743492 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3336] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02737] cytochrome c oxidase assembly factor CtaG |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.149309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGAGT GGAACTTTGA GCCGGGTTTG ATCGCAAACC TGGCGCTGAT TGCAGGAGGG
TACGCGCTCT GCGTCACCGG TCCGCTGCGG CGCTTTTTTC CCGGCAGTGC GCCGCCGACG
CCGGTGCAGG TGCGCCTGTT CTATGTCGGG TGGGTGGTGC TGTTTATCGC GCTGGCGTCA
CCTATCGACA GTCTGGCGAG TTACCTGCTG ACGATGCATA TGCTCCAGCA TTTGTTGCTG
GCGATGGTTG CTCCTCCTTT CTTGCTGCTT GGTCTGCCGC GTTGGGTTCT TCGTCCCATA
ATGCGTGTCC CTGGCGCGTA TCCTGTCGGT TCGTTCCTCA CCAATCCGGT CGTCGTATTC
TTCGCCTTCA ATGCCGTTTT TGCACTCTGG CATGTGCCCG CTTACTATGA TCTCGCCCTG
CGTGATGAGC GTATCCATAT TCTTGAGCAC GTCATGTTCT TTGTTGTCGG CGTGCTTTCG
TGGTGGCCTA TCTGTAGCCC GATGGACGAG TTGCCTTCCG CACATCCACT GATGCAGACG
GCGTATCTTT TCTTCATGTC GCTGCCGACG ACGATTATTG GCGCGCTGAT TGCGTTCGCC
GAAGCGCCGC TCTACCCGTT CTACGCTCTG CGTCCGCGTC TTTGGGGCGT CTCACTCGGT
GATGATCAAC AACTGGCGGG GTTGATCATG TGGGTGCCTG GCAGCCTGAT CTACTTTGCG
GTTCTGACCG TCGTGTTCAT TCGCTGGCTG AACCGGGAGG ATGGCGATGA ACTGAGGTTA
GAGGTTAGGG GTTAG
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| Protein sequence | MYEWNFEPGL IANLALIAGG YALCVTGPLR RFFPGSAPPT PVQVRLFYVG WVVLFIALAS
PIDSLASYLL TMHMLQHLLL AMVAPPFLLL GLPRWVLRPI MRVPGAYPVG SFLTNPVVVF
FAFNAVFALW HVPAYYDLAL RDERIHILEH VMFFVVGVLS WWPICSPMDE LPSAHPLMQT
AYLFFMSLPT TIIGALIAFA EAPLYPFYAL RPRLWGVSLG DDQQLAGLIM WVPGSLIYFA
VLTVVFIRWL NREDGDELRL EVRG
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