| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3551 |
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| Symbol | |
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| ID | 5541052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4632603 |
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| End bp | 4634501 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895670 |
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| Product | ABC transporter related |
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| Protein accession | YP_001433618 |
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| Protein GI | 156743489 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.127969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTCC TCATGGACGG CCTGGCGGCC GAGGCATACG ACCGCAGTTA CAGTGATCGG
GCGCTGATCC GGCGCATCTG GCGCTATTTC CGCCCCCACA GCGGGCGCGT CGCGCTGGTG
GCGCTCATGG TTGTCCTCGG ATCACTCGTC GCAACGGTCA TTCCGATCAC GATTTCGCGC
AGCATCGAAC TGCTGACAGG CGACCCGGCG GCTCAGGTGT TGATCGGACT CGCCGCCATC
ATCGCCGTTA TGGGCGCGTT GGGGTGGTTC TTCAACTTCG TGCGGCAGAC CTTCTCGGCG
CGCGCGGTTG GCGATGTGGT GCTGGCGCTG CGCGAAGACG CATATCGCGC CGTGTTGCAG
CGCGATATGT CGTTCTACGA CCAGTACGCC TCGGGGCGCA TCGTCAGCCG GGTAACCTCG
GATACGCAGG ATTTTGCAAC GGTCGTGACG CTGACAATCG ATCTGCTCAG CCAGTTGTTG
CTGGTCGTGA TCATCGCAGT GGTCATGGTC ACGATCAACT GGCAACTGGC GCTGATCACG
CTGGCGACCG GTCCGATTGT CATTGCGGCG GCGCTGACGT TCCGCCATGT TGCGCGACTG
ACGACGCGCC AGGCGCAACG CGCGCTGGCG AATGTCAACG CTTCGATCCA GGAAACGGTC
AGCGGCATTG CAGTCGCTAA AAGTTTCCGC CAGGAAGCGG CGATCTATCA GCAGTTCCGC
CAGACGAACG AACTGGCGTT TCAGGTGCGT TTGCGCCAGG GACTCGTCTT CAGCAGTATC
TTTCCGATAT TGAACCTGCT CTCCGGTATT GCCATTGCCA CAATTATCTA CTTCGGCGGA
CGGTTGGCGC TTGGTGGGTC GGTTTCGGTT GGGGAATGGT ATCTGTTTGT GCAGAGTCTG
GCGATCTACT TCTTCCCATT GACCAGCATC GCGTCGTTCT GGAGCCAGTT TCAACAAGGG
TTATCCGCTA GCGAGCGCGT CTTCGCACTG ATCGACGCCG AGCCGAAGGT GGTGCAGATT
GGGAATGAAC CGGCGCCACA CCTCATCGGG CGTATCGAGT TTCGGGATGT GTGGTTCACC
TACGATACCG GACAGGATCG CACCGCAGGA TCGCCATCGT CCGCATCGGT GCAGTGGGTG
TTGCCGGGGT TCTCGCTCGT GATCCCCGCG GGGCAGAAAC TGGCCGTCGT GGGGCACACC
GGCGCCGGCA AGTCGAGCCT GATCAAACTG ATCACCCGCT TCTATGAGTT TCAGGCAGGT
CAATTGCTCA TCGACGGACG CGATATTCGC GCGCTGGACC TGGCGCAGTA CCGCCGACAG
ATCGGGCTGG TGCCGCAGTC GCCGTTTTTG TTTTCCGGTA CCGTCGCCGA CAACATTCGC
TATGGTCGTC CAGAAGCGAC GATGGCGGAT GTGGAGACGG CAGCGCGCCG GTTGGGGAGC
GAGTGGATCG CGGACCTGCC CCATGGTCTG GAGACGGATG TCGGCGAGCG CGGCGCGCGA
CTGTCGCTTG GGCAAAGGCA GTTGGTCGCA TTGGCGCGGG TTCTGTTGCA AAACCCATCG
ATCTTCATCC TCGACGAAGC CACGGCGAGC ATCGATCCAT TCACCGAAAC CCAGGTTCAG
GAAGGGCTGG ATGTCGTGAT GCAGGGGCGA ACGAGCATTA TTATTGCCCA CCGTCTCTCG
ACCGTCCGTA CCGCCGACCG GATCATTGTG CTCAAACAGG GGCGAATCAT CGAAGAAGGA
AACCACGACG ATCTTCTGGC ATCGGGCGGG CATTACGCCG AACTGTACAA TACGTACTTC
CGCCACCAGT CGCTGGATTA TAAGCCATGG GAGGAAGAGA GCCGAGAACT GAGCGCCAAG
AACCTGGGAT CGCAGGCGTT TCGCCCGCAT GCGGGTTAG
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| Protein sequence | MGFLMDGLAA EAYDRSYSDR ALIRRIWRYF RPHSGRVALV ALMVVLGSLV ATVIPITISR
SIELLTGDPA AQVLIGLAAI IAVMGALGWF FNFVRQTFSA RAVGDVVLAL REDAYRAVLQ
RDMSFYDQYA SGRIVSRVTS DTQDFATVVT LTIDLLSQLL LVVIIAVVMV TINWQLALIT
LATGPIVIAA ALTFRHVARL TTRQAQRALA NVNASIQETV SGIAVAKSFR QEAAIYQQFR
QTNELAFQVR LRQGLVFSSI FPILNLLSGI AIATIIYFGG RLALGGSVSV GEWYLFVQSL
AIYFFPLTSI ASFWSQFQQG LSASERVFAL IDAEPKVVQI GNEPAPHLIG RIEFRDVWFT
YDTGQDRTAG SPSSASVQWV LPGFSLVIPA GQKLAVVGHT GAGKSSLIKL ITRFYEFQAG
QLLIDGRDIR ALDLAQYRRQ IGLVPQSPFL FSGTVADNIR YGRPEATMAD VETAARRLGS
EWIADLPHGL ETDVGERGAR LSLGQRQLVA LARVLLQNPS IFILDEATAS IDPFTETQVQ
EGLDVVMQGR TSIIIAHRLS TVRTADRIIV LKQGRIIEEG NHDDLLASGG HYAELYNTYF
RHQSLDYKPW EEESRELSAK NLGSQAFRPH AG
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