Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3547 |
Symbol | |
ID | 5541048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4625989 |
End bp | 4627365 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640895666 |
Product | hypothetical protein |
Protein accession | YP_001433614 |
Protein GI | 156743485 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0722197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAG TAACGGATGA GTTGTTGGTG GAGGCGTTGC TTGCGATTGA AGAGACCAAT ACACCAATGA CGTTTAGCGA GATCGCCAAA AGCATCAGCA AACGACGTGG TGGCGTTCAA CTGACAGATG ATGAAATAGG GGACTTAAGA GAATGTCTCT ACCAGAACGG GAACATGTAC ATCCTCTGGT CTGCCAAAGA CCGAACCTGG ACAATCACAC CTGAAGGGCG CGCTTACGCA CGTCAGATCA GCATTGAGCC TGAAGAGCTC GTGGACATTT CAGAAACTGA TGAAGCGCTT GAGCCTAAAG GCGCGCCTTT CAATCCAGCA CTGATCAAGG TCGATGTCGA TCAGATGCAT ATCTATCACG CCCTTAAGCT TATTCGTGAG CAAAGACTCG TTCTTCAGCC AGAATTTCAG CGCAATTTTA TTTGGGACGA AGTTCGTCAA AGCCGTCTTA TTGAGTCTAT TCTTCTTCGT ATCGCGCTGC CAGCATTTTA TCTTGATGCT CCGAGGGAAG ACACCTACGT CGTCATTGAT GGTCTCCAAC GTCTGAAAAC TCTCGACCGC TTTTGCAATG AAAAATCGCT CAAACTAACT GGTTTGGAAT ACCTGCGCGA GTTTGAGAAT CACGGGTTTA GCGATCTCCC TTCCCATATG CGATCCCGCC TTGAAGAAAC ACGCCTCACG ATGCACATCA TTCGACCAGA AACCCCTTTG CAGGTCAAAT TCATTATCTT TCGCCGTATC AATACTGGCG GTTTAGTCTT GACCAATCAG GAGATCAGAC ATGCGCTCTA TCAAGGAAAT GATGGACGCG CTTCTCGTTT GCTCAAGAAC CTCGCTGAAA GCCCGGAATT TCTCGATGCG ACTGATCGTT CGATCAGTCC GCGACGGATG GATGATCGTG AATGTGTTCT GCGTTTTCTT ACGTTTGTGC GTTATCCATA CGAGCAGTTC GGTCGAAACA TGAGCGTTGG CGAACCGCCA AACCTTGATG GATTGCTGAA TCGTACCATG GCAGACCTGA ATGCACTGCC CTTTGAGGAA CATGATAGGC TCAAAGAGGT GTTCCGCGAT AGCATGTGTA AGGCGCATCT CGTATTCGGT CGCCATGCTT TTCGCAAGAT ATACGGACGC AATCAGAAAC GTCAACCGAT TAGCAAACCG CTTTTCGAGG TCTGGAGCAC ACTGCTCCGC GATTGGCCAA TCGAAATTCT GGAACAGCGC CGTGAACAAT TAATCGATGG TTTTATCGAA ATTATGCAAC ATGATTTTGA CTTCATCAAG TCTATCTCAT ATGGTACAGG AAGCGTAAGG GCAGTTAAGT ATCGCTTTGA CCGAATCAAT AGAATGCTTC GAGAAACTCT GCGATGA
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Protein sequence | MSIVTDELLV EALLAIEETN TPMTFSEIAK SISKRRGGVQ LTDDEIGDLR ECLYQNGNMY ILWSAKDRTW TITPEGRAYA RQISIEPEEL VDISETDEAL EPKGAPFNPA LIKVDVDQMH IYHALKLIRE QRLVLQPEFQ RNFIWDEVRQ SRLIESILLR IALPAFYLDA PREDTYVVID GLQRLKTLDR FCNEKSLKLT GLEYLREFEN HGFSDLPSHM RSRLEETRLT MHIIRPETPL QVKFIIFRRI NTGGLVLTNQ EIRHALYQGN DGRASRLLKN LAESPEFLDA TDRSISPRRM DDRECVLRFL TFVRYPYEQF GRNMSVGEPP NLDGLLNRTM ADLNALPFEE HDRLKEVFRD SMCKAHLVFG RHAFRKIYGR NQKRQPISKP LFEVWSTLLR DWPIEILEQR REQLIDGFIE IMQHDFDFIK SISYGTGSVR AVKYRFDRIN RMLRETLR
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