| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3533 |
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| Symbol | |
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| ID | 5541032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4605458 |
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| End bp | 4606471 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895651 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001433601 |
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| Protein GI | 156743472 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACCG GTCATTGGTA TAACACCGAA TGTCTGGAGA TGATCATGCC CGTAAACGAA
ACTTCCTATA CAGGCGCGCT CGAACACGTC GCCATTGCGG ATGAACGCGC CGCCGGGCGC
ATCTTCATGC GCGGGCGCGA CCGCGCTGCG TTGCTGCACC GCCTCTCTAC CAACGACATC
GAGCGCCTGA ATCCAGGCGA GGGGACGCTG ACCGCGCTTA CGACACCAAT CGGACGGATC
ATCGATCTGC TCACCGTGCA TGCGCTCGAC GATACGCTCC TCATCGTTAC CAGCCCCGAC
CAGGGACCGC CGGTGTTCGG GCATCTGCGC CGCAACATCT TCTTCAACGA CCAGGTGACG
CTGGAACCTG CGGGACGCAC CTATACGCAG GTGGCAGTGT ACGGTCCGCA GGCGGCGCGC
ACGCTCGCAG AACTGATCGG CGCGGAGATC CATCTGCCAT TGCATGGTAT CACACCCGCC
ACCCTCGCGG GGGTAAGCCT GCTGCTTGCG CGTCGCAAAC CGATCGGCGG CGATAGTTTC
ACGCTCTACG TCCCGTCCGA TGGCGCCGAT GCTGTGTATG CTGCACTTCT CACCGCCGGC
GCAGCAGCAC TGGACGCCGA AACGCTCGAT GTGCTACGAG TCGAACAGGG GTATGGCGCA
TTCGGACGTG AACTGAGCCA GGAGTACATT CCGCTGGAAA CCGGGCTGCT GGACGCCGTG
AGTTTCACCA AGGGATGCTA CGTCGGGCAG GAAATTATTG CGCGCATGGA GAGCCGTGGG
CGCCTGGCAA AGCGGTTGTG CGGTCTTCGG TTGAGTCATC CCGTCGTGGC GCCGGCAAAA
CTCCAGGTCG ATGGCAGGGA TGCCGGCGAC CTGACGAGCG CCGTCGTGTC GCCACGATTC
GGACCGATTG CACTGGCATA TGTGCGCACG GCGTATGCCG AGCCGGGGAC GGTCGTTGGA
GTGGACGGGT TCACAGCAAC GGGAAGGGTG ATCGAACTGC CGTTTGCAGT GTGA
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| Protein sequence | MFTGHWYNTE CLEMIMPVNE TSYTGALEHV AIADERAAGR IFMRGRDRAA LLHRLSTNDI
ERLNPGEGTL TALTTPIGRI IDLLTVHALD DTLLIVTSPD QGPPVFGHLR RNIFFNDQVT
LEPAGRTYTQ VAVYGPQAAR TLAELIGAEI HLPLHGITPA TLAGVSLLLA RRKPIGGDSF
TLYVPSDGAD AVYAALLTAG AAALDAETLD VLRVEQGYGA FGRELSQEYI PLETGLLDAV
SFTKGCYVGQ EIIARMESRG RLAKRLCGLR LSHPVVAPAK LQVDGRDAGD LTSAVVSPRF
GPIALAYVRT AYAEPGTVVG VDGFTATGRV IELPFAV
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