| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3500 |
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| Symbol | |
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| ID | 5540999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4567859 |
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| End bp | 4568734 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640895618 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001433568 |
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| Protein GI | 156743439 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.334303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCT TTTGGCAGGC GCTGGCCAGC GGCATTGCTG TTGGTGTCGT CTATGCGTTG
ATTGCGCTCG GTTTCAACAT CATCTTTCAA ACCACTCGCA TTATCAACTT CGCGCAGGGT
GAATTTGTGA TGATTGGCGC ATTGGTTGGC TACACCCTGA CAGTGGTGCT GGGCTGGCCG
ATCGTGCTGG CATTGGCAGG AGTAGCGTTG ATATCGGCAC TGGTCGGTAT TGTAAGCGAA
CGATTGATTA TGTTGCCGAT TCAGCGCTCA TCGTACCGCT ATAGCTGGAT TATCACCACT
CTGGCAGTGG CTATTATCTT CCGTAACCTG ATGGGCGCCG AATGGCTCTA CGGTCGTGAA
GACTATCGTG TGCCGCCGCT CATACCCGGC GTATTCTTTG TCGGACCGGC AGTTGTCGCT
TACCAGCAGG TTATTATTCT CGTGATTGCA GTCATATTAT TGATCCTGAT CGAGGTGTTC
TACCGGCGAA CCTTCTTTGG TAAGGCCATT CGGGCGACCG CGTTCAACTA CAATATTGCC
GGATTAATGG GGATTCCCGT GCCGATGATG ATCCGGCTCA GCTTTGCTCT CAGCGCCGTT
CTCAGCGGTA TCGCCGGCGT GTTGGTCGCG CCGCTGATCT TCGCCAATGT CAGCATGGGC
ATCCTGATTG GGCTTAAAGG GTTTGTGGCC ATCATCCTTG GCGGGCTGGG CAGCCCGCGC
GGCGCAGTCA TTGGTGGGCT GATCGTTGGT CTGCTCGACA CCTCCGTCCG CGCATTAGCC
CCTGAAGGGT GGGGAAACTT TATCGTCTTC GGCGTACTTG CGCTGGTCTT GCTGATCCGG
CCAACCGGAC TGTTTGGCAA ACCTGGCGCG CATTGA
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| Protein sequence | MTVFWQALAS GIAVGVVYAL IALGFNIIFQ TTRIINFAQG EFVMIGALVG YTLTVVLGWP
IVLALAGVAL ISALVGIVSE RLIMLPIQRS SYRYSWIITT LAVAIIFRNL MGAEWLYGRE
DYRVPPLIPG VFFVGPAVVA YQQVIILVIA VILLILIEVF YRRTFFGKAI RATAFNYNIA
GLMGIPVPMM IRLSFALSAV LSGIAGVLVA PLIFANVSMG ILIGLKGFVA IILGGLGSPR
GAVIGGLIVG LLDTSVRALA PEGWGNFIVF GVLALVLLIR PTGLFGKPGA H
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