Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3492 |
Symbol | |
ID | 5540991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4557521 |
End bp | 4559458 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895610 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_001433560 |
Protein GI | 156743431 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCA ATCTCAAAAT CGCATCGATT CCCCAGATCG AGATCGATCC GGTCACGCTC GACATTATCG AAAACGCGCT CAAGAACACC CGCTACGAGA TGGACGCCGT GCTCTACCGC ACGGCGATGA GCCCGGTGAT CCGCGAGCAG CACGACCAGT TTCCGATGAT TACCGATCCG CACGGGCGGA TGATCGTCGG CCAGTTCGGT TCGTATATCG CCGGCCTGCT CGACCATTGG AATCAGACGA TCGAACCCGG CGATGTGATT TTACTCTCCG ATCCGTATCT CTGTGGCGGC GCGATCAGCC ACATCAACGA CTTGCTGGTG ATGCTGCCGA TCTTCTACGG CGAGGGTGAG CATCGCGAAC TGATCGGCTG GGCCAGCATG TTCGGCCATG CCCAAGATGT GGGTGGTCCA TTGCCCGGCT CGCTGCCTAC TAACGCCACC ACCATCTTCG GCGAAGGGCT GCGCTTGCCA CCGGTCAAGA TTTACGAACG CGGCAAACTC AACCGAGCCG TGCTCGACAT CATGCTCAAC AACGTCCGCC AGCCTGAAAT GAACCGCGCC GACCTGATGG CGATCATCGC CAGTTGCCGC ACCGCCGAGA AGCGGGTGAT CGAGCTGTGC GACCGCTTCG GCAAAGATGT CTATCTGGCA GCCACTCAAG CCCTGCTCGA TCGCACCTAT CGGGCGATGA AAGAGCTTAT CGTGCGCAAC TTGCCTGAAG AACCACAGTC GTTTGAAGAC TACGTCGATG ACGACGGTTT GGGCAATGGA CCATTTAAGA TGAAACTAAC CATTTGGCGT GAAGGGCACG AAGCCTACTT TGACTGGACG GGTACCGACC CGCAGGCGAT GGGGCCGATC AACTTCTACC TCAACGAGTC GATGTTCAAG ATGTTCATCG GCGTCTACCT GATTATGGTT TTTGACCCAC AAATCCTGTT CAACGACGGC TTCTACCCGC TGCTGCACGT CACCATGCCC AAAGGCAGTC TTATCCAGCC GGAGTTTCCG GCTGCACTGG GATGCCGCAC CCATGCCCTC ACCCGCCTCT TCGACGTGCT CGGCGGTGCG CTGGCCAAGC GGGCGCCGGA GTTTACCACC GCTGCTGGCT ATGGCACCTC GCCCTACCTG CTCTATTCCG GCTACGACAA AGACGGCGAA TTCTTCTATC TCATGGAGAT CAACTACGGT GGTATTCCCG GTCGCCCGAT TGGCGACGGA ATGGACGGAC ACTCGTGGTG GCCGCTCTTC ACCAACATCC CCACCGAATA CCTTGAGAGC TACTACCCGA TCCGGATCGA ACGCTACACC AGCATCATGG ACTCAGGCGG GGCCGGCTTC CACCGTGGCG GGAATGGTAT CGAGAAGATC TACACCTTCC TCGAGCCGGG CGAAATCTCG ATCCACGACG ACCGCTGGTT AACACCGCCG TGGGGCAACG TCGGCGGTAA GCCGGGTAGT CGGTCAACGA AGATTCTTGT GCGTACCGAT GGCACACGCA AGGTACTGCC CAGCAAGTGC GACCAAATTG CGGTTGAGCC AGGTGATCAA TTGATTTACC GCACTGCCGG TGGCGGCGGT TGGAAAGACT CGCTCACCCG CCCGGCAGAA GCGGTGCAGC GTGATGTACG CTACGGGTTG GTCAGCCGTG AGAAGGCCCT GAATGACTAC GGCGTCGTAC TGATCGACAC GTTAGACATC GACATGGCCG CTACCGAAGC CAAACGCGCC GAGCTGGCTG CTGCCCGTGG CGAAATCAAA GGCTTCGACT TCGGACCGCC GCTGGAAGAG TTGCTGGCCA ATGCCGAAGT CGAGACCGGC CTGCCCGCGC CGCGCAAACC GCAACCGGTG CGGTGGGCCA TGGCCCGTGC CGCCCGGCGC GAACGCATGG CCCAACCCGC CGAACAACGC GAGGTCACAG TAGACTAG
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Protein sequence | MATNLKIASI PQIEIDPVTL DIIENALKNT RYEMDAVLYR TAMSPVIREQ HDQFPMITDP HGRMIVGQFG SYIAGLLDHW NQTIEPGDVI LLSDPYLCGG AISHINDLLV MLPIFYGEGE HRELIGWASM FGHAQDVGGP LPGSLPTNAT TIFGEGLRLP PVKIYERGKL NRAVLDIMLN NVRQPEMNRA DLMAIIASCR TAEKRVIELC DRFGKDVYLA ATQALLDRTY RAMKELIVRN LPEEPQSFED YVDDDGLGNG PFKMKLTIWR EGHEAYFDWT GTDPQAMGPI NFYLNESMFK MFIGVYLIMV FDPQILFNDG FYPLLHVTMP KGSLIQPEFP AALGCRTHAL TRLFDVLGGA LAKRAPEFTT AAGYGTSPYL LYSGYDKDGE FFYLMEINYG GIPGRPIGDG MDGHSWWPLF TNIPTEYLES YYPIRIERYT SIMDSGGAGF HRGGNGIEKI YTFLEPGEIS IHDDRWLTPP WGNVGGKPGS RSTKILVRTD GTRKVLPSKC DQIAVEPGDQ LIYRTAGGGG WKDSLTRPAE AVQRDVRYGL VSREKALNDY GVVLIDTLDI DMAATEAKRA ELAAARGEIK GFDFGPPLEE LLANAEVETG LPAPRKPQPV RWAMARAARR ERMAQPAEQR EVTVD
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