Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3487 |
Symbol | |
ID | 5540986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4549593 |
End bp | 4550156 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895605 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001433555 |
Protein GI | 156743426 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAA CATCAGAAAC ATCGCTGACG TTGACGTTGG GCGCCATTGC GCCCGATTTC ACCCTGACTG ATACGGTATC GGGCAAAACG ATGTCGCTGA GCGATCTGAA ATCGCCCAAG GCGACGGTTA TTCTGTTCAT CTGCAATCAC TGCCCGTATG TCAAGCATGT TGATCGGGCG CTTGTTCGCC TGGCGCAGGA CTATATGCCG CAGGGGGTGT CGTTCATCGC TATCAGTTCT AATGATCCAA TCCAGTACCC GGAAGACTCG CCGGAGAGGA TGCGCGAGGA GGCGCTGCGC GTCGGCTATC CCTTCCCCTA TCTGTTCGAT GAGACACAGG ATGTCGCGCG CGCGTATGGC GCCGCCTGCA CCCCCGACAC TTTCATCTTC GACGGCGACC TGCGTCTTGT CTACCGCGGA CAACTCGACG ATACCCGTCC GAGCAGCGGC AGAGAGGCGA CCGCCGCCGA TGTGCGCGCC GCGCTCGATG CTATTCTGTC CGGTCAACCG GTGAACGCAG TGCAGAAGCC GAGCGTCGGG TGCAGTATCA AGTGGAAGCG GTAG
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Protein sequence | MPATSETSLT LTLGAIAPDF TLTDTVSGKT MSLSDLKSPK ATVILFICNH CPYVKHVDRA LVRLAQDYMP QGVSFIAISS NDPIQYPEDS PERMREEALR VGYPFPYLFD ETQDVARAYG AACTPDTFIF DGDLRLVYRG QLDDTRPSSG REATAADVRA ALDAILSGQP VNAVQKPSVG CSIKWKR
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