| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3476 |
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| Symbol | |
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| ID | 5540975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4538994 |
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| End bp | 4539974 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895594 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001433544 |
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| Protein GI | 156743415 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000916186 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000245691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGATTTT TCAAACGCAT GTTTGGGCGC GGACAGGACG CGCCGCGCAG TGAGGAAGAA
GCCAGACAGG AAGAACAGAA GATCGACCGG GCGACTGCGA AAGCACGCCA CGGTCTTTTC
GGTCAAATTG CCAGCCTGTT CGCCACCGAC GAACCGATCA CCGATGAACT ATGGGACGAC
CTCGAAGCGC TGCTGATTCA GGCGGATGTC GGCGTCGAAA CGACCATGTA CCTGGTCAAC
CGCACGAAGG ACCGCTGCAA CCGCTACGGC GTCAAACGGG CGCGTGAGGC GCGCGATATG
CTGAAGGCGG AGATGGTGCG CGTGTTGCAG GAACAGGAGC GGCGCCAACC GGTCAATGCG
AATCCCTCTA TTGTGCTGGT GGTCGGCGTC AATGGTGCAG GCAAAACGAC CCTGATTGCA
AAACTGGCGT ATCGCCTGAA GAATCAATTC GGTAAACGCG TGCTGCTGGC GGCAGGTGAC
ACCTTCCGCG CTGCTGCGAC CGAGCAACTC GAAACCTGGG CGGAACGGGT GGGTGTGCCG
GTTATTTCAC GCGGTCAGGG CGCCGACCCC GGCGCTGTGG TGTACGATGC CATCGAAGCC
GTTAGCGGCG GCGATTTCGA TGTGTTGATC ATCGACACTG CCGGGCGCCT GCATGCTAAA
ACGAACCTGA TGCTGGAATT GCAAAAGTTG CGCAATATCA TCCGGCGAAA GTTCCCCGAT
GCCCCGCACG AGGTGCTGCT GGTTATCGAC GCCACAACCG GACAGAATGG TGTGCTTCAG
GCGAAATCGT TCTTGAAAGC GGTGGATGTG ACTGATGTGG CAGTAACGAA ACTCGACGGC
ACTGCCAAGG GGGGGATTGC ATTCGCCATC GCGCAGGACA TCGAGCGCCC GATCCGTTAT
GTCGGCACTG GCGAGAAAAT GACCGATCTG GCGCTCTTCG ATGCGGAAAC GTTCGTTGAG
TCGTTGTTTG CGCAGGATTA A
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| Protein sequence | MGFFKRMFGR GQDAPRSEEE ARQEEQKIDR ATAKARHGLF GQIASLFATD EPITDELWDD
LEALLIQADV GVETTMYLVN RTKDRCNRYG VKRAREARDM LKAEMVRVLQ EQERRQPVNA
NPSIVLVVGV NGAGKTTLIA KLAYRLKNQF GKRVLLAAGD TFRAAATEQL ETWAERVGVP
VISRGQGADP GAVVYDAIEA VSGGDFDVLI IDTAGRLHAK TNLMLELQKL RNIIRRKFPD
APHEVLLVID ATTGQNGVLQ AKSFLKAVDV TDVAVTKLDG TAKGGIAFAI AQDIERPIRY
VGTGEKMTDL ALFDAETFVE SLFAQD
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