Gene Rcas_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3438 
Symbol 
ID5540937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4487433 
End bp4487690 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content60% 
IMG OID640895556 
Producthypothetical protein 
Protein accessionYP_001433506 
Protein GI156743377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0556142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAGC TGATTGTTCA GATTGTCGTC GTGAGTCTCT GGGGCGCAAT GATAACCGTT 
CACACCCGTC GCCTGTTGCG TCTTGCGCGC ATTGAAGCGC CGGCATCGCT CCGCGGGAGC
CGGTTGCGCC AGAATCTGTC GCGCGTTTGG TGGTGGTTGG GGCGTGAAGA GTTCTGGCGC
GCCGTTCAGA TCGATGGCTT GCGCTGCACA CAGATCACGG TGATGCTCTT CCTGCTTGCC
CTCGGATTGC TGGTGTAA
 
Protein sequence
MVELIVQIVV VSLWGAMITV HTRRLLRLAR IEAPASLRGS RLRQNLSRVW WWLGREEFWR 
AVQIDGLRCT QITVMLFLLA LGLLV